RNA–Protein interactions for RNA: ENST00000468965.2

SCAP-210, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-210ENST00000468965 GPR34Q9UPC5 381 aa12.9□□□□□ -0.34
SCAP-210ENST00000468965 CRYL1Q9Y2S2 319 aa12.9□□□□□ -0.34
SCAP-210ENST00000468965 GPSM3Q9Y4H4 160 aa12.9□□□□□ -0.34
SCAP-210ENST00000468965 ASXL3Q9C0F0 2248 aa12.9□□□□□ -0.34
SCAP-210ENST00000468965 ZFHX2Q9C0A1 2572 aaPredicted RBP12.9□□□□□ -0.34
SCAP-210ENST00000468965 RP1P56715 2156 aa12.9□□□□□ -0.34
SCAP-210ENST00000468965 PRR19A6NJB7 356 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 IQCF5A8MTL0 148 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 H3BM21 787 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 KMOO15229 486 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 DFNA5O60443 496 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 POP7O75817 140 aaKnown RBP12.89□□□□□ -0.35
SCAP-210ENST00000468965 ACP5P13686 325 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 DGKAP23743 735 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 AK4P27144 223 aaPredicted RBP12.89□□□□□ -0.35
SCAP-210ENST00000468965 EPHA8P29322 1005 aaPredicted RBP12.89□□□□□ -0.35
SCAP-210ENST00000468965 PBLDP30039 288 aaPredicted RBP12.89□□□□□ -0.35
SCAP-210ENST00000468965 FMO4P31512 558 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 PHBP35232 272 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 BLKP51451 505 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 ADARP55265 1226 aaKnown RBP12.89□□□□□ -0.35
SCAP-210ENST00000468965 CTBSQ01459 385 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 ZNF658BQ4V348 819 aaPredicted RBP12.89□□□□□ -0.35
SCAP-210ENST00000468965 PRRT3Q5FWE3 981 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 CHST15Q7LFX5 561 aaPredicted RBP12.89□□□□□ -0.35
SCAP-210ENST00000468965 HDXQ7Z353 690 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 STRA8Q7Z7C7 330 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 SLC26A11Q86WA9 606 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 LRRC6Q86X45 466 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 SPNS2Q8IVW8 549 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 CTAGE3PQ8IX95 158 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 KRT222Q8N1A0 295 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 PPM1NQ8N819 430 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 ZNF548Q8NEK5 533 aaPredicted RBP12.89□□□□□ -0.35
SCAP-210ENST00000468965 GABPB2Q8TAK5 448 aaPredicted RBP12.89□□□□□ -0.35
SCAP-210ENST00000468965 GPBAR1Q8TDU6 330 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 LINC00615Q96LM1 132 aaPredicted RBP12.89□□□□□ -0.35
SCAP-210ENST00000468965 TIMM29Q9BSF4 260 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 EDEM2Q9BV94 578 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 TRNAU1APQ9NX07 287 aaKnown RBP12.89□□□□□ -0.35
SCAP-210ENST00000468965 GNPTGQ9UJJ9 305 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 MED16Q9Y2X0 877 aa12.89□□□□□ -0.35
SCAP-210ENST00000468965 A0A087WUV0 522 aaPredicted RBP12.88□□□□□ -0.35
SCAP-210ENST00000468965 PFDN6O15212 129 aa12.88□□□□□ -0.35
SCAP-210ENST00000468965 AQP9O43315 295 aa12.88□□□□□ -0.35
SCAP-210ENST00000468965 NIPSNAP2O75323 286 aa12.88□□□□□ -0.35
SCAP-210ENST00000468965 FAM155BO75949 473 aa12.88□□□□□ -0.35
SCAP-210ENST00000468965 GIMD1P0DJR0 217 aa12.88□□□□□ -0.35
SCAP-210ENST00000468965 PKMP14618 531 aaKnown RBP12.88□□□□□ -0.35
SCAP-210ENST00000468965 HSD17B3P37058 310 aa12.88□□□□□ -0.35
SCAP-210ENST00000468965 CD151P48509 253 aa12.88□□□□□ -0.35
SCAP-210ENST00000468965 ARRB1P49407 418 aaPredicted RBP12.88□□□□□ -0.35
SCAP-210ENST00000468965 CCT8P50990 548 aa12.88□□□□□ -0.35
SCAP-210ENST00000468965 SLC29A2Q14542 456 aa12.88□□□□□ -0.35
SCAP-210ENST00000468965 INSCQ1MX18 579 aa12.88□□□□□ -0.35
SCAP-210ENST00000468965 RBM20Q5T481 1227 aaKnown RBP12.88□□□□□ -0.35
SCAP-210ENST00000468965 PTRHD1Q6GMV3 140 aaKnown RBP12.88□□□□□ -0.35
SCAP-210ENST00000468965 FAM83HQ6ZRV2 1179 aaPredicted RBP12.88□□□□□ -0.35
SCAP-210ENST00000468965 ZC3HC1Q86WB0 502 aaKnown RBP12.88□□□□□ -0.35
SCAP-210ENST00000468965 GATAD2AQ86YP4 633 aa12.88□□□□□ -0.35
SCAP-210ENST00000468965 SLC25A45Q8N413 288 aa12.88□□□□□ -0.35
SCAP-210ENST00000468965 LMX1AQ8TE12 382 aa12.88□□□□□ -0.35
SCAP-210ENST00000468965 SAP25Q8TEE9 199 aa12.88□□□□□ -0.35
SCAP-210ENST00000468965 UBLCP1Q8WVY7 318 aaPredicted RBP12.88□□□□□ -0.35
SCAP-210ENST00000468965 CDKL2Q92772 493 aa12.88□□□□□ -0.35
SCAP-210ENST00000468965 ZNF514Q96K75 400 aaPredicted RBP12.88□□□□□ -0.35
SCAP-210ENST00000468965 AARSD1Q9BTE6 412 aaKnown RBP12.88□□□□□ -0.35
SCAP-210ENST00000468965 DNAAF2Q9NVR5 837 aaKnown RBP12.88□□□□□ -0.35
SCAP-210ENST00000468965 NSMCE4AQ9NXX6 385 aa12.88□□□□□ -0.35
SCAP-210ENST00000468965 SPASTQ9UBP0 616 aa12.88□□□□□ -0.35
SCAP-210ENST00000468965 KCNK6Q9Y257 313 aa12.88□□□□□ -0.35
SCAP-210ENST00000468965 VPS9D1Q9Y2B5 631 aa12.88□□□□□ -0.35
SCAP-210ENST00000468965 PCDHB1Q9Y5F3 818 aa12.88□□□□□ -0.35
SCAP-210ENST00000468965 DNMT3AQ9Y6K1 912 aaPredicted RBP12.88□□□□□ -0.35
SCAP-210ENST00000468965 MGAT4DA6NG13 374 aa12.87□□□□□ -0.35
SCAP-210ENST00000468965 QSOX1O00391 747 aa12.87□□□□□ -0.35
SCAP-210ENST00000468965 MAP2K7O14733 419 aa12.87□□□□□ -0.35
SCAP-210ENST00000468965 YKT6O15498 198 aa12.87□□□□□ -0.35
SCAP-210ENST00000468965 ATP8B1O43520 1251 aa12.87□□□□□ -0.35
SCAP-210ENST00000468965 GDF9O60383 454 aa12.87□□□□□ -0.35
SCAP-210ENST00000468965 SASH3O75995 380 aa12.87□□□□□ -0.35
SCAP-210ENST00000468965 ESR1P03372 595 aa12.87□□□□□ -0.35
SCAP-210ENST00000468965 OR56A5P0C7T3 313 aa12.87□□□□□ -0.35
SCAP-210ENST00000468965 ZNF883P0CG24 379 aa12.87□□□□□ -0.35
SCAP-210ENST00000468965 CTSEP14091 401 aa12.87□□□□□ -0.35
SCAP-210ENST00000468965 ITGB6P18564 788 aa12.87□□□□□ -0.35
SCAP-210ENST00000468965 GP5P40197 560 aa12.87□□□□□ -0.35
SCAP-210ENST00000468965 ATXN3P54252 364 aaPredicted RBP12.87□□□□□ -0.35
SCAP-210ENST00000468965 CSE1LP55060 971 aaKnown RBP12.87□□□□□ -0.35
SCAP-210ENST00000468965 ARHGAP8P85298 464 aa12.87□□□□□ -0.35
SCAP-210ENST00000468965 TIAL1Q01085 375 aaKnown RBP eCLIP12.87□□□□□ -0.35
SCAP-210ENST00000468965 DMPKQ09013 629 aa12.87□□□□□ -0.35
SCAP-210ENST00000468965 NAB1Q13506 487 aa12.87□□□□□ -0.35
SCAP-210ENST00000468965 LRP8Q14114 963 aa12.87□□□□□ -0.35
SCAP-210ENST00000468965 NFE2L1Q14494 772 aa12.87□□□□□ -0.35
SCAP-210ENST00000468965 AASDHQ4L235 1098 aaPredicted RBP12.87□□□□□ -0.35
SCAP-210ENST00000468965 NAPRTQ6XQN6 538 aa12.87□□□□□ -0.35
SCAP-210ENST00000468965 FSTL5Q8N475 847 aaPredicted RBP12.87□□□□□ -0.35
SCAP-210ENST00000468965 LILRA3Q8N6C8 439 aaPredicted RBP12.87□□□□□ -0.35
SCAP-210ENST00000468965 ACVR1CQ8NER5 493 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms