RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 TLK1Q9UKI8 766 aa17.25■□□□□ 0.35
RPL39-202ENST00000468844 HS3ST3A1Q9Y663 406 aa17.25■□□□□ 0.35
RPL39-202ENST00000468844 TMEM120BA0PK00 339 aa17.24■□□□□ 0.35
RPL39-202ENST00000468844 QSOX1O00391 747 aa17.24■□□□□ 0.35
RPL39-202ENST00000468844 CHUKO15111 745 aa17.24■□□□□ 0.35
RPL39-202ENST00000468844 PRPF4O43172 522 aaKnown RBP eCLIP17.24■□□□□ 0.35
RPL39-202ENST00000468844 NUAK1O60285 661 aa17.24■□□□□ 0.35
RPL39-202ENST00000468844 RPA3P35244 121 aaPredicted RBP17.24■□□□□ 0.35
RPL39-202ENST00000468844 NUDT1P36639 197 aa17.24■□□□□ 0.35
RPL39-202ENST00000468844 PPP2R2AP63151 447 aa17.24■□□□□ 0.35
RPL39-202ENST00000468844 DLG1Q12959 904 aa17.24■□□□□ 0.35
RPL39-202ENST00000468844 TPRG1LQ5T0D9 272 aa17.24■□□□□ 0.35
RPL39-202ENST00000468844 NAPRTQ6XQN6 538 aa17.24■□□□□ 0.35
RPL39-202ENST00000468844 ABI3BPQ7Z7G0 1075 aa17.24■□□□□ 0.35
RPL39-202ENST00000468844 WDR5BQ86VZ2 330 aa17.24■□□□□ 0.35
RPL39-202ENST00000468844 TRAPPC5Q8IUR0 188 aa17.24■□□□□ 0.35
RPL39-202ENST00000468844 SPATA6LQ8N4H0 392 aa17.24■□□□□ 0.35
RPL39-202ENST00000468844 HSPA12BQ96MM6 686 aa17.24■□□□□ 0.35
RPL39-202ENST00000468844 C12orf65Q9H3J6 166 aaKnown RBP17.24■□□□□ 0.35
RPL39-202ENST00000468844 GULP1Q9UBP9 304 aa17.24■□□□□ 0.35
RPL39-202ENST00000468844 TRMT6Q9UJA5 497 aaKnown RBP17.24■□□□□ 0.35
RPL39-202ENST00000468844 DHRS7Q9Y394 339 aa17.24■□□□□ 0.35
RPL39-202ENST00000468844 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 CACNB4O00305 520 aaPredicted RBP17.23■□□□□ 0.35
RPL39-202ENST00000468844 FUCA1P04066 466 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 CCDC166P0CW27 439 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 CCR7P32248 378 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 CRHR1P34998 444 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 SKIV2L2P42285 1042 aaKnown RBP17.23■□□□□ 0.35
RPL39-202ENST00000468844 CCT5P48643 541 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 BCL7AQ4VC05 210 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 KYAT3Q6YP21 454 aaKnown RBP17.23■□□□□ 0.35
RPL39-202ENST00000468844 OTOAQ7RTW8 1153 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 C11orf96Q7Z7L8 435 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 LONP2Q86WA8 852 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 TMEFF1Q8IYR6 380 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 TCP10LQ8TDR4 215 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 KCTD4Q8WVF5 259 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 SELENOSQ9BQE4 189 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 FAM126AQ9BYI3 521 aaPredicted RBP17.23■□□□□ 0.35
RPL39-202ENST00000468844 UNKQ9C0B0 810 aaKnown RBP17.23■□□□□ 0.35
RPL39-202ENST00000468844 KCNK9Q9NPC2 374 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 LATS2Q9NRM7 1088 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 SPATS2LQ9NUQ6 558 aaKnown RBP17.23■□□□□ 0.35
RPL39-202ENST00000468844 EIF2B4Q9UI10 523 aaKnown RBP17.23■□□□□ 0.35
RPL39-202ENST00000468844 GPR34Q9UPC5 381 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 SMG5Q9UPR3 1016 aaKnown RBP17.23■□□□□ 0.35
RPL39-202ENST00000468844 GOLGA4Q13439 2230 aaKnown RBP17.23■□□□□ 0.35
RPL39-202ENST00000468844 A0A087X1B8 175 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 MAP3K13O43283 966 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 GPR37L1O60883 481 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 TSPAN12O95859 305 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 CEACAM5P06731 702 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 HOXC4P09017 264 aaPredicted RBP17.23■□□□□ 0.35
RPL39-202ENST00000468844 CD27P26842 260 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 KIAA1024LP59773 190 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 GTF2H3Q13889 308 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 CSHL1Q14406 222 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 UGT3A1Q6NUS8 523 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 TBC1D1Q86TI0 1168 aaPredicted RBP17.23■□□□□ 0.35
RPL39-202ENST00000468844 CPNE9Q8IYJ1 553 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 ZNF514Q96K75 400 aaPredicted RBP17.23■□□□□ 0.35
RPL39-202ENST00000468844 SLC6A18Q96N87 628 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 SLC17A4Q9Y2C5 497 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 ANKRD6Q9Y2G4 727 aa17.23■□□□□ 0.35
RPL39-202ENST00000468844 ADAMTS9Q9P2N4 1935 aa17.22■□□□□ 0.35
RPL39-202ENST00000468844 A6NNZ2 444 aa17.22■□□□□ 0.35
RPL39-202ENST00000468844 GLRA3O75311 464 aa17.22■□□□□ 0.35
RPL39-202ENST00000468844 KLHL2O95198 593 aa17.22■□□□□ 0.35
RPL39-202ENST00000468844 FTH1P02794 183 aa17.22■□□□□ 0.35
RPL39-202ENST00000468844 MAOBP27338 520 aa17.22■□□□□ 0.35
RPL39-202ENST00000468844 AOAHP28039 575 aa17.22■□□□□ 0.35
RPL39-202ENST00000468844 YPEL5P62699 121 aa17.22■□□□□ 0.35
RPL39-202ENST00000468844 SRSF5Q13243 272 aaKnown RBP17.22■□□□□ 0.35
RPL39-202ENST00000468844 NFATC4Q14934 902 aa17.22■□□□□ 0.35
RPL39-202ENST00000468844 CCDC91Q7Z6B0 441 aa17.22■□□□□ 0.35
RPL39-202ENST00000468844 SLC22A18ASQ8N1D0 253 aa17.22■□□□□ 0.35
RPL39-202ENST00000468844 OR13H1Q8NG92 308 aa17.22■□□□□ 0.35
RPL39-202ENST00000468844 NXNL1Q96CM4 212 aa17.22■□□□□ 0.35
RPL39-202ENST00000468844 GPR78Q96P69 363 aa17.22■□□□□ 0.35
RPL39-202ENST00000468844 DUSP15Q9H1R2 295 aaPredicted RBP17.22■□□□□ 0.35
RPL39-202ENST00000468844 SYTL2Q9HCH5 934 aa17.22■□□□□ 0.35
RPL39-202ENST00000468844 FGF22Q9HCT0 170 aa17.22■□□□□ 0.35
RPL39-202ENST00000468844 MRPL40Q9NQ50 206 aaKnown RBP17.22■□□□□ 0.35
RPL39-202ENST00000468844 IGSF5Q9NSI5 407 aa17.22■□□□□ 0.35
RPL39-202ENST00000468844 DCDC2Q9UHG0 476 aa17.22■□□□□ 0.35
RPL39-202ENST00000468844 FBXO4Q9UKT5 387 aa17.22■□□□□ 0.35
RPL39-202ENST00000468844 PRKAB1Q9Y478 270 aa17.22■□□□□ 0.35
RPL39-202ENST00000468844 PCM1Q15154 2024 aa17.21■□□□□ 0.35
RPL39-202ENST00000468844 RALGAPA1Q6GYQ0 2036 aa17.21■□□□□ 0.35
RPL39-202ENST00000468844 MEI4A8MW99 385 aa17.21■□□□□ 0.35
RPL39-202ENST00000468844 GPR89AB7ZAQ6 455 aa17.21■□□□□ 0.35
RPL39-202ENST00000468844 MAGEC1O60732 1142 aa17.21■□□□□ 0.35
RPL39-202ENST00000468844 GPR89BP0CG08 455 aa17.21■□□□□ 0.35
RPL39-202ENST00000468844 COL6A2P12110 1019 aa17.21■□□□□ 0.35
RPL39-202ENST00000468844 AVPR2P30518 371 aa17.21■□□□□ 0.35
RPL39-202ENST00000468844 SLC26A3P40879 764 aa17.21■□□□□ 0.35
RPL39-202ENST00000468844 ATP1A2P50993 1020 aa17.21■□□□□ 0.35
RPL39-202ENST00000468844 BOP1Q14137 746 aaKnown RBP17.21■□□□□ 0.35
RPL39-202ENST00000468844 CRTC3Q6UUV7 619 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms