RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 TMEM159Q96B96 161 aa11.33□□□□□ -0.6
CDHR3-205ENST00000468143 CDKN2AIPNLQ96HQ2 116 aa11.33□□□□□ -0.6
CDHR3-205ENST00000468143 COPS8Q99627 209 aa11.33□□□□□ -0.6
CDHR3-205ENST00000468143 CPNE5Q9HCH3 593 aa11.33□□□□□ -0.6
CDHR3-205ENST00000468143 NLE1Q9NVX2 485 aaPredicted RBP11.33□□□□□ -0.6
CDHR3-205ENST00000468143 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.33□□□□□ -0.6
CDHR3-205ENST00000468143 OGFRQ9NZT2 677 aa11.33□□□□□ -0.6
CDHR3-205ENST00000468143 PCDHGA7Q9Y5G6 932 aa11.33□□□□□ -0.6
CDHR3-205ENST00000468143 CFAP20Q9Y6A4 193 aaKnown RBP11.33□□□□□ -0.6
CDHR3-205ENST00000468143 DNMT3AQ9Y6K1 912 aaPredicted RBP11.33□□□□□ -0.6
CDHR3-205ENST00000468143 KNTC1P50748 2209 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 WDFY3Q8IZQ1 3526 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 MGAT4DA6NG13 374 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 OR51F1A6NGY5 319 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 EFCAB7A8K855 629 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 AGAP14A8MT82 685 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 HGSO14964 777 aaPredicted RBP11.32□□□□□ -0.6
CDHR3-205ENST00000468143 SGTAO43765 313 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 KCNJ13O60928 360 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 UBXN7O94888 489 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 CSTF2P33240 577 aaKnown RBP eCLIP11.32□□□□□ -0.6
CDHR3-205ENST00000468143 HALP42357 657 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 MLLT3P42568 568 aaPredicted RBP11.32□□□□□ -0.6
CDHR3-205ENST00000468143 ARSDP51689 593 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 EPHA4P54764 986 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 GFERP55789 205 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 DMPKQ09013 629 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 CDH17Q12864 832 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 CLN3Q13286 438 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 TRA2AQ13595 282 aaKnown RBP eCLIP11.32□□□□□ -0.6
CDHR3-205ENST00000468143 GPR18Q14330 331 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 RPE65Q16518 533 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 ARHGAP40Q5TG30 622 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 AGAP9Q5VTM2 703 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 BROXQ5VW32 411 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 WDR74Q6RFH5 385 aaPredicted RBP11.32□□□□□ -0.6
CDHR3-205ENST00000468143 WASH2PQ6VEQ5 465 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 SERPINA9Q86WD7 417 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 FAM129CQ86XR2 697 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 REXO1L1PQ8IX06 675 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 CFAP206Q8IYR0 622 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 AGBL5Q8NDL9 886 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 SPDYE1Q8NFV5 336 aaPredicted RBP11.32□□□□□ -0.6
CDHR3-205ENST00000468143 STYXQ8WUJ0 223 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 ART4Q93070 314 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 ULK4Q96C45 1275 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 FCRL3Q96P31 734 aaPredicted RBP11.32□□□□□ -0.6
CDHR3-205ENST00000468143 INSM2Q96T92 566 aaPredicted RBP11.32□□□□□ -0.6
CDHR3-205ENST00000468143 DPYSL5Q9BPU6 564 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 DPH1Q9BZG8 443 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 WWP1Q9H0M0 922 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 PRORYQ9H606 182 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 SLC40A1Q9NP59 571 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 WASH6PQ9NQA3 447 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 POT1Q9NUX5 634 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 IMP3Q9NV31 184 aaKnown RBP11.32□□□□□ -0.6
CDHR3-205ENST00000468143 TRMT1Q9NXH9 659 aaKnown RBP11.32□□□□□ -0.6
CDHR3-205ENST00000468143 ZDHHC3Q9NYG2 299 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 PAK5Q9P286 719 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 SLC2A6Q9UGQ3 507 aa11.32□□□□□ -0.6
CDHR3-205ENST00000468143 DRG1Q9Y295 367 aaKnown RBP11.32□□□□□ -0.6
CDHR3-205ENST00000468143 ADAMTS20P59510 1910 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 SCN8AQ9UQD0 1980 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 MROH6A6NGR9 719 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 LILRA5A6NI73 299 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 ERI2A8K979 691 aaKnown RBP11.31□□□□□ -0.6
CDHR3-205ENST00000468143 NVLO15381 856 aaKnown RBP11.31□□□□□ -0.6
CDHR3-205ENST00000468143 SUN1O94901 812 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 GAS8O95995 478 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 APRTP07741 180 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 RALBP11234 206 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 ATP1B2P14415 290 aaPredicted RBP11.31□□□□□ -0.6
CDHR3-205ENST00000468143 ACRV1P26436 265 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 LEPRP48357 1165 aaKnown RBP11.31□□□□□ -0.6
CDHR3-205ENST00000468143 BASP1P80723 227 aaKnown RBP11.31□□□□□ -0.6
CDHR3-205ENST00000468143 CACNG1Q06432 222 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 SRSF6Q13247 344 aaKnown RBP11.31□□□□□ -0.6
CDHR3-205ENST00000468143 SEMA5AQ13591 1074 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 GSE1Q14687 1217 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 TRIP13Q15645 432 aaPredicted RBP11.31□□□□□ -0.6
CDHR3-205ENST00000468143 GPR33Q49SQ1 333 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 BCL7AQ4VC05 210 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 METRNLQ641Q3 311 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 DUS1LQ6P1R4 473 aaKnown RBP11.31□□□□□ -0.6
CDHR3-205ENST00000468143 XKR5Q6UX68 686 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 ARHGAP22Q7Z5H3 698 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 PIANPQ8IYJ0 282 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 CLDN19Q8N6F1 224 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 AVL9Q8NBF6 648 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 GPR150Q8NGU9 434 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 OR2L2Q8NH16 312 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 MAIP1Q8WWC4 291 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 RSC1A1Q92681 617 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 RNF31Q96EP0 1072 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 MS4A14Q96JA4 679 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 ZNF514Q96K75 400 aaPredicted RBP11.31□□□□□ -0.6
CDHR3-205ENST00000468143 ZNF778Q96MU6 729 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 TGM7Q96PF1 710 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 TAAR9Q96RI9 348 aa11.31□□□□□ -0.6
CDHR3-205ENST00000468143 CTRCQ99895 268 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms