RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	ZNF140	P52738	457 aa	Predicted RBP	11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	KIAA1024L	P59773	190 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	AARS2	Q5JTZ9	985 aa	Known RBP	11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	C6orf132	Q5T0Z8	1188 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	TEDDM1	Q5T9Z0	273 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	NEPRO	Q6NW34	567 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	TRMT10B	Q6PF06	316 aa	Known RBP	11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	LVRN	Q6Q4G3	990 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	ENPP7	Q6UWV6	458 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	TIFAB	Q6ZNK6	161 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	CCDC91	Q7Z6B0	441 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	SDR16C5	Q8N3Y7	309 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	FSTL5	Q8N475	847 aa	Predicted RBP	11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	TTC30B	Q8N4P2	665 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	PLA2G15	Q8NCC3	412 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	OR13J1	Q8NGT2	312 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	DCAKD	Q8WVC6	231 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	TSACC	Q96A04	125 aa	Predicted RBP	11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	TLCD1	Q96CP7	247 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	CDKN2AIPNL	Q96HQ2	116 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	COQ10A	Q96MF6	247 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	WDR92	Q96MX6	357 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	CENPH	Q9H3R5	247 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	SSU72	Q9NP77	194 aa	Known RBP	11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	IL17C	Q9P0M4	197 aa		11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	11.93	□□□□□ -0.5
CTNS-205	ENST00000467663	APC2	O95996	2303 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	TDRD6	O60522	2096 aa	Known RBP	11.92	□□□□□ -0.5
CTNS-205	ENST00000467663		A8MX80	341 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	VAPB	O95292	243 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	ALPI	P09923	528 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	KRT15	P19012	456 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	GCA	P28676	217 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	VIPR1	P32241	457 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	RPIA	P49247	311 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	SLC18A1	P54219	525 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	SRP54	P61011	504 aa	Known RBP	11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	ARHGEF7	Q14155	803 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	ACOX1	Q15067	660 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	ELOC	Q15369	112 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	NR0B2	Q15466	257 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	CDKN3	Q16667	212 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	HSP90AA5P	Q58FG0	334 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	RNF187	Q5TA31	235 aa	Predicted RBP	11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	LYPLAL1	Q5VWZ2	237 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	GUSBP11	Q6P575	273 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	PACS1	Q6VY07	963 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	CERS6	Q6ZMG9	384 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	HID1	Q8IV36	788 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	SLC35F3	Q8IY50	421 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	OR4L1	Q8NH43	312 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	IFI44	Q8TCB0	444 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	ACMSD	Q8TDX5	336 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	GLMN	Q92990	594 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	FUBP1	Q96AE4	644 aa	Known RBP	11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	CABS1	Q96KC9	395 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	ZNF778	Q96MU6	729 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	PLEKHG4B	Q96PX9	1271 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	CNOT10	Q9H9A5	744 aa	Known RBP	11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	PKD2L2	Q9NZM6	624 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	KL	Q9UEF7	1012 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	DGKB	Q9Y6T7	804 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	FREM2	Q5SZK8	3169 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	ANKRD11	Q6UB99	2663 aa	Predicted RBP	11.92	□□□□□ -0.5
CTNS-205	ENST00000467663	ZFHX4	Q86UP3	3567 aa		11.92	□□□□□ -0.5
CTNS-205	ENST00000467663		A0A087WV48	116 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	C1orf232	A0A0U1RR37	186 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	CPED1	A4D0V7	1026 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	TMEM202	A6NGA9	273 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	CACNB4	O00305	520 aa	Predicted RBP	11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	TNFRSF10C	O14798	259 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	TNF	P01375	233 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	CELA2B	P08218	269 aa	Predicted RBP	11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	ERVK-10	P10266	1014 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	CTSE	P14091	401 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	KEL	P23276	732 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	SLCO1A2	P46721	670 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	LEPR	P48357	1165 aa	Known RBP	11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	LIMK2	P53671	638 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	DCDC1	P59894	354 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	GPR33	Q49SQ1	333 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	FASTKD1	Q53R41	847 aa	Known RBP	11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	UBAP2	Q5T6F2	1119 aa	Known RBP	11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	KCTD16	Q68DU8	428 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	PNCK	Q6P2M8	343 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	CES3	Q6UWW8	571 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	EFL1	Q7Z2Z2	1120 aa	Known RBP	11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	TRABD2A	Q86V40	505 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	LCA5	Q86VQ0	697 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	C2CD4A	Q8NCU7	369 aa	Predicted RBP	11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	OR4K2	Q8NGD2	314 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	OR56A4	Q8NGH8	313 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	OR6P1	Q8NGX9	317 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	MAPK15	Q8TD08	544 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	NAT6	Q93015	286 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	HDAC10	Q969S8	669 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	ARL8A	Q96BM9	186 aa		11.91	□□□□□ -0.5
CTNS-205	ENST00000467663	DEPDC7	Q96QD5	511 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms