RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 SEMA3GQ9NS98 782 aa9.99□□□□□ -0.81
HDAC3-203ENST00000467533 FAM207AQ9NSI2 230 aaPredicted RBP9.99□□□□□ -0.81
HDAC3-203ENST00000467533 SLC23A2Q9UGH3 650 aa9.99□□□□□ -0.81
HDAC3-203ENST00000467533 GPN3Q9UHW5 284 aaPredicted RBP9.99□□□□□ -0.81
HDAC3-203ENST00000467533 CACNA1CQ13936 2221 aa9.99□□□□□ -0.81
HDAC3-203ENST00000467533 CCDC88CQ9P219 2028 aa9.99□□□□□ -0.81
HDAC3-203ENST00000467533 NCOA6Q14686 2063 aaPredicted RBP9.98□□□□□ -0.81
HDAC3-203ENST00000467533 CCDC78A2IDD5 438 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 TMEM150CB9EJG8 249 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 EEF2KO00418 725 aaKnown RBP9.98□□□□□ -0.81
HDAC3-203ENST00000467533 KMOO15229 486 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 DAPK3O43293 454 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 CCP110O43303 1012 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 ALOX12BO75342 701 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 KLF7O75840 302 aaPredicted RBP9.98□□□□□ -0.81
HDAC3-203ENST00000467533 UNC5CO95185 931 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 MMEP08473 750 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 PDHA1P08559 390 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 ESRRAP11474 423 aaPredicted RBP9.98□□□□□ -0.81
HDAC3-203ENST00000467533 ZNF7P17097 686 aaPredicted RBP9.98□□□□□ -0.81
HDAC3-203ENST00000467533 AGAP20933 346 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 PON1P27169 355 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 HTR7P34969 479 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 PPP1R2P41236 205 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 HALP42357 657 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 AIF1P55008 147 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 CASP6P55212 293 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 SRSF11Q05519 484 aaKnown RBP9.98□□□□□ -0.81
HDAC3-203ENST00000467533 ADCY2Q08462 1091 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 HENMT1Q5T8I9 393 aaKnown RBP9.98□□□□□ -0.81
HDAC3-203ENST00000467533 IGFL2Q6UWQ7 119 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 ABRAXAS1Q6UWZ7 409 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 B4GALNT4Q76KP1 1039 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 LRRTM4Q86VH4 590 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 OOSP2Q86WS3 158 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 CREBRFQ8IUR6 639 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 BBS5Q8N3I7 341 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 PGBD5Q8N414 524 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 CPLX3Q8WVH0 158 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 PIH1D2Q8WWB5 315 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 ZNF599Q96NL3 588 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 SPOCK3Q9BQ16 436 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 C17orf62Q9BQA9 187 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 DPH2Q9BQC3 489 aaPredicted RBP9.98□□□□□ -0.81
HDAC3-203ENST00000467533 MGME1Q9BQP7 344 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 TIMM29Q9BSF4 260 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 SELENOOQ9BVL4 669 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 DNPEPQ9ULA0 475 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 PPIL1Q9Y3C6 166 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 ADGRG1Q9Y653 693 aa9.98□□□□□ -0.81
HDAC3-203ENST00000467533 A0A0J9YYE9 177 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 OR5K3A6NET4 321 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 CLDN7O95471 211 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 TRBC1P01850 177 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 KRT3P12035 628 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 IDSP22304 550 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 CSNK1G2P78368 415 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 KRT85P78386 507 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 RBPJQ06330 500 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 LTBQ06643 244 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 PKP1Q13835 747 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 CDSNQ15517 529 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 ZNF569Q5MCW4 686 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 AGAP9Q5VTM2 703 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 PRAMEF13Q5VWM6 474 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 ZNF324BQ6AW86 544 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-203ENST00000467533 SMYD5Q6GMV2 418 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 ARMC6Q6NXE6 501 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 RPUSD3Q6P087 351 aaKnown RBP9.97□□□□□ -0.81
HDAC3-203ENST00000467533 FBXO38Q6PIJ6 1188 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 PPP1R32Q7Z5V6 425 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 NOP9Q86U38 636 aaKnown RBP9.97□□□□□ -0.81
HDAC3-203ENST00000467533 NPWQ8N729 165 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 OR1L3Q8NH93 324 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 EPS8L1Q8TE68 723 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 WDR24Q96S15 920 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 MDFIQ99750 246 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 FAM83DQ9H4H8 585 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 SIX2Q9NPC8 291 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 GPATCH2LQ9NWQ4 482 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 HRASLS2Q9NWW9 162 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 PKD2L2Q9NZM6 624 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 SEC14L3Q9UDX4 400 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 NDOR1Q9UHB4 597 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 BTRCQ9Y297 605 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 FHOD1Q9Y613 1164 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 DOCK10Q96BY6 2186 aa9.97□□□□□ -0.81
HDAC3-203ENST00000467533 C1orf232A0A0U1RR37 186 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 CCDC66A2RUB6 948 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 GPR89AB7ZAQ6 455 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 E7EQ34 232 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 AGPSO00116 658 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 SLC25A14O95258 325 aaPredicted RBP9.96□□□□□ -0.82
HDAC3-203ENST00000467533 GPR89BP0CG08 455 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 VCLP18206 1134 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 MMP8P22894 467 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 IL4RP24394 825 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 DNAJA1P31689 397 aaKnown RBP9.96□□□□□ -0.82
HDAC3-203ENST00000467533 IST1P53990 364 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 FOXD4Q12950 439 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms