RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 LRRN4Q8WUT4 740 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 HDAC11Q96DB2 347 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 C19orf60Q96EN9 201 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 IMP4Q96G21 291 aaKnown RBP11.93□□□□□ -0.5
UBR4-211ENST00000467272 BTBD6Q96KE9 485 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 CD180Q99467 661 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 MAP3K3Q99759 626 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 SPATA16Q9BXB7 569 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 XPO4Q9C0E2 1151 aaKnown RBP11.93□□□□□ -0.5
UBR4-211ENST00000467272 CASS4Q9NQ75 786 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 RTN4Q9NQC3 1192 aaKnown RBP11.93□□□□□ -0.5
UBR4-211ENST00000467272 DNAJC16Q9Y2G8 782 aa11.93□□□□□ -0.5
UBR4-211ENST00000467272 OR5K3A6NET4 321 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 TLCD2A6NGC4 264 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 PDZK1P1A8MUH7 402 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 DPM1O60762 260 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 KCNJ13O60928 360 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 MTX2O75431 263 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 CYP1A2P05177 515 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 MSL3P1P0C860 447 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 CA5AP35218 305 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 RPS15P62841 145 aaKnown RBP11.92□□□□□ -0.5
UBR4-211ENST00000467272 PPIDQ08752 370 aaKnown RBP11.92□□□□□ -0.5
UBR4-211ENST00000467272 ZBTB17Q13105 803 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 SLC14A2Q15849 920 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 RPE65Q16518 533 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 IGFL3Q6UXB1 125 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 FAM83HQ6ZRV2 1179 aaPredicted RBP11.92□□□□□ -0.5
UBR4-211ENST00000467272 CPNE8Q86YQ8 564 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 DSELQ8IZU8 1212 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 ZBTB2Q8N680 514 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 OR8K5Q8NH50 307 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 SNRNP40Q96DI7 357 aaKnown RBP11.92□□□□□ -0.5
UBR4-211ENST00000467272 RANBP9Q96S59 729 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 ZNF670Q9BS34 389 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 ADGRE3Q9BY15 652 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 NLNQ9BYT8 704 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 CHST8Q9H2A9 424 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 ACSS2Q9NR19 701 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 RAD18Q9NS91 495 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 MYO1AQ9UBC5 1043 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 TCFL5Q9UL49 500 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 NENFQ9UMX5 172 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 BTRCQ9Y297 605 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 MTORP42345 2549 aa11.92□□□□□ -0.5
UBR4-211ENST00000467272 MEN1O00255 615 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 AURKAO14965 403 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 KRT86O43790 486 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 SCRG1O75711 98 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 TMEM63AO94886 807 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 CDK14O94921 469 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 TMEM115Q12893 351 aaPredicted RBP11.91□□□□□ -0.5
UBR4-211ENST00000467272 ABRQ12979 859 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 GALNT3Q14435 633 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 ASIC2Q16515 512 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 PLEKHN1Q494U1 663 aaPredicted RBP11.91□□□□□ -0.5
UBR4-211ENST00000467272 ATP13A5Q4VNC0 1218 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 FAM69BQ5VUD6 431 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 ALS2CLQ60I27 953 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 ZNF385CQ66K41 422 aaPredicted RBP11.91□□□□□ -0.5
UBR4-211ENST00000467272 FAM198BQ6UWH4 519 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 RHOT1Q8IXI2 618 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 CXorf40BQ96DE9 158 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 THAP2Q9H0W7 228 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 KCND1Q9NSA2 647 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 LMBRD1Q9NUN5 540 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 C5AR2Q9P296 337 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 IP6K2Q9UHH9 426 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 SHOC2Q9UQ13 582 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 ZNF711Q9Y462 761 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 SPO11Q9Y5K1 396 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 C2CD3Q4AC94 2353 aa11.91□□□□□ -0.5
UBR4-211ENST00000467272 KCNK1O00180 336 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 GAPDHSO14556 408 aaPredicted RBP11.9□□□□□ -0.5
UBR4-211ENST00000467272 KLF7O75840 302 aaPredicted RBP11.9□□□□□ -0.5
UBR4-211ENST00000467272 ZBTB11O95625 1053 aaPredicted RBP11.9□□□□□ -0.5
UBR4-211ENST00000467272 PIRTP0C851 137 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 MX2P20592 715 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 TNFRSF8P28908 595 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 HMGCLP35914 325 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 VAV2P52735 878 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 CTSCP53634 463 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 GSDMDP57764 484 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 KRT81Q14533 505 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 PDK2Q15119 407 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 GPR19Q15760 415 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 CCDC122Q5T0U0 273 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 FAM182AQ5T1J6 154 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 PRAMEF17Q5VTA0 474 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 KLHL35Q6PF15 583 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 MED25Q71SY5 747 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 PLD5Q8N7P1 536 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 ENDOVQ8N8Q3 282 aaKnown RBP11.9□□□□□ -0.5
UBR4-211ENST00000467272 RASGEF1AQ8N9B8 481 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 TMEM102Q8N9M5 508 aaPredicted RBP11.9□□□□□ -0.5
UBR4-211ENST00000467272 ANKRD20A12PQ8NF67 263 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 PRR7Q8TB68 274 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 ZFPM2Q8WW38 1151 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 INPP5DQ92835 1189 aa11.9□□□□□ -0.5
UBR4-211ENST00000467272 MFRPQ9BY79 579 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms