RNA–Protein interactions for RNA: ENST00000466636.1

SRPRB-202, Transcript of SRP receptor subunit beta, humanhuman

TSL 3

Gene SRPRB, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-202ENST00000466636 AQP5P55064 265 aa9.4□□□□□ -0.9
SRPRB-202ENST00000466636 MRPS21P82921 87 aaKnown RBP9.4□□□□□ -0.9
SRPRB-202ENST00000466636 GRSF1Q12849 480 aaKnown RBP eCLIP9.4□□□□□ -0.9
SRPRB-202ENST00000466636 PRKAA1Q13131 559 aa9.4□□□□□ -0.9
SRPRB-202ENST00000466636 SPRED3Q2MJR0 410 aa9.4□□□□□ -0.9
SRPRB-202ENST00000466636 TTLL9Q3SXZ7 439 aa9.4□□□□□ -0.9
SRPRB-202ENST00000466636 GALNTL6Q49A17 601 aa9.4□□□□□ -0.9
SRPRB-202ENST00000466636 LACTB2Q53H82 288 aaPredicted RBP9.4□□□□□ -0.9
SRPRB-202ENST00000466636 ZNF678Q5SXM1 525 aa9.4□□□□□ -0.9
SRPRB-202ENST00000466636 ZNF648Q5T619 568 aaPredicted RBP9.4□□□□□ -0.9
SRPRB-202ENST00000466636 CCDC121Q6ZUS5 278 aa9.4□□□□□ -0.9
SRPRB-202ENST00000466636 FRMD7Q6ZUT3 714 aa9.4□□□□□ -0.9
SRPRB-202ENST00000466636 DET1Q7L5Y6 550 aa9.4□□□□□ -0.9
SRPRB-202ENST00000466636 WDR75Q8IWA0 830 aaKnown RBP9.4□□□□□ -0.9
SRPRB-202ENST00000466636 FITM2Q8N6M3 262 aa9.4□□□□□ -0.9
SRPRB-202ENST00000466636 CCNYL1Q8N7R7 359 aa9.4□□□□□ -0.9
SRPRB-202ENST00000466636 RASGEF1AQ8N9B8 481 aa9.4□□□□□ -0.9
SRPRB-202ENST00000466636 CXorf40AQ8TE69 158 aa9.4□□□□□ -0.9
SRPRB-202ENST00000466636 EXT2Q93063 718 aa9.4□□□□□ -0.9
SRPRB-202ENST00000466636 SKA1Q96BD8 255 aa9.4□□□□□ -0.9
SRPRB-202ENST00000466636 PHF21BQ96EK2 531 aa9.4□□□□□ -0.9
SRPRB-202ENST00000466636 DCUN1D1Q96GG9 259 aa9.4□□□□□ -0.9
SRPRB-202ENST00000466636 MSANTD3Q96H12 275 aa9.4□□□□□ -0.9
SRPRB-202ENST00000466636 CDX2Q99626 313 aaPredicted RBP9.4□□□□□ -0.9
SRPRB-202ENST00000466636 STN1Q9H668 368 aaKnown RBP9.4□□□□□ -0.9
SRPRB-202ENST00000466636 DNAJC28Q9NX36 388 aa9.4□□□□□ -0.9
SRPRB-202ENST00000466636 SERGEFQ9UGK8 458 aa9.4□□□□□ -0.9
SRPRB-202ENST00000466636 TMCO1Q9UM00 188 aa9.4□□□□□ -0.9
SRPRB-202ENST00000466636 SCN8AQ9UQD0 1980 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 PRRC2BQ5JSZ5 2229 aaKnown RBP9.39□□□□□ -0.91
SRPRB-202ENST00000466636 ZNF106Q9H2Y7 1883 aaKnown RBP9.39□□□□□ -0.91
SRPRB-202ENST00000466636 A0A1W2PP55 124 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 LRRC14BA6NHZ5 514 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 STX16-NPEPL1H3BU86 382 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 K7ESM1 405 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 STX16O14662 325 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 GRID2O43424 1007 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 NUAK1O60285 661 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 DCTN3O75935 186 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 KIAA0754O94854 1291 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 UBOX5O94941 541 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 RPS17P08708 135 aaKnown RBP9.39□□□□□ -0.91
SRPRB-202ENST00000466636 CBSLP0DN79 551 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 ENO3P13929 434 aaPredicted RBP9.39□□□□□ -0.91
SRPRB-202ENST00000466636 HOXB2P14652 356 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 MSH3P20585 1137 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 CBSP35520 551 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 IDH3AP50213 366 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 RPL14P50914 215 aaKnown RBP9.39□□□□□ -0.91
SRPRB-202ENST00000466636 HK2P52789 917 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 HERVK_113P63132 956 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 GALNT1Q10472 559 aaPredicted RBP9.39□□□□□ -0.91
SRPRB-202ENST00000466636 TUBB3Q13509 450 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 STARD3Q14849 445 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 AGERQ15109 404 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 PPP1R3AQ16821 1122 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 PFKFB4Q16877 469 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 LEXMQ3ZCV2 418 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 CFAP157Q5JU67 520 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 SDE2Q6IQ49 451 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 SBSNQ6UWP8 590 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.39□□□□□ -0.91
SRPRB-202ENST00000466636 TRMT11Q7Z4G4 463 aaKnown RBP9.39□□□□□ -0.91
SRPRB-202ENST00000466636 RAB44Q7Z6P3 723 aaPredicted RBP9.39□□□□□ -0.91
SRPRB-202ENST00000466636 ADAMTSL2Q86TH1 951 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 CACUL1Q86Y37 369 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 GPSM1Q86YR5 675 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 PHYKPLQ8IUZ5 450 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 RASGRP3Q8IV61 690 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 MYO1HQ8N1T3 1032 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 FBXO39Q8N4B4 442 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 HDDC3Q8N4P3 179 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 STON2Q8WXE9 905 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 HLA-CQ95604 372 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 ERP27Q96DN0 273 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 GUCD1Q96NT3 240 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 EBF4Q9BQW3 602 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 TRMOQ9BU70 441 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 C1QTNF3Q9BXJ4 246 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 ERVK-6Q9BXR3 956 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 MKRN2Q9H000 416 aaKnown RBP9.39□□□□□ -0.91
SRPRB-202ENST00000466636 ILKAPQ9H0C8 392 aaPredicted RBP9.39□□□□□ -0.91
SRPRB-202ENST00000466636 WWP1Q9H0M0 922 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 MYLK2Q9H1R3 596 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 SLC2A4RGQ9NR83 387 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 NUDT4Q9NZJ9 180 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 HEY2Q9UBP5 337 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 ZDHHC2Q9UIJ5 367 aa9.39□□□□□ -0.91
SRPRB-202ENST00000466636 MATN2O00339 956 aa9.38□□□□□ -0.91
SRPRB-202ENST00000466636 QSOX1O00391 747 aa9.38□□□□□ -0.91
SRPRB-202ENST00000466636 UBFD1O14562 309 aaKnown RBP9.38□□□□□ -0.91
SRPRB-202ENST00000466636 INPP4BO15327 924 aa9.38□□□□□ -0.91
SRPRB-202ENST00000466636 RNASEH2AO75792 299 aaKnown RBP9.38□□□□□ -0.91
SRPRB-202ENST00000466636 SIX3O95343 332 aaPredicted RBP9.38□□□□□ -0.91
SRPRB-202ENST00000466636 FTH1P02794 183 aa9.38□□□□□ -0.91
SRPRB-202ENST00000466636 MPC1LP0DKB6 136 aa9.38□□□□□ -0.91
SRPRB-202ENST00000466636 SRFP11831 508 aa9.38□□□□□ -0.91
SRPRB-202ENST00000466636 GFAPP14136 432 aa9.38□□□□□ -0.91
SRPRB-202ENST00000466636 HOXB1P14653 301 aaPredicted RBP9.38□□□□□ -0.91
SRPRB-202ENST00000466636 SERPINB3P29508 390 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms