RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 NCF1CA8MVU1 366 aaPredicted RBP20.83■□□□□ 0.92
PPP1R3F-203ENST00000466508 FADS2P1A8MWK0 482 aa20.83■□□□□ 0.92
PPP1R3F-203ENST00000466508 PRR5-ARHGAP8B1AHC4 643 aa20.83■□□□□ 0.92
PPP1R3F-203ENST00000466508 CFAP99D6REC4 459 aa20.83■□□□□ 0.92
PPP1R3F-203ENST00000466508 C1QTNF3-AMACRE9PGA6 284 aa20.83■□□□□ 0.92
PPP1R3F-203ENST00000466508 NEMP1O14524 444 aa20.83■□□□□ 0.92
PPP1R3F-203ENST00000466508 WNT9AO14904 365 aa20.83■□□□□ 0.92
PPP1R3F-203ENST00000466508 SNX2O60749 519 aa20.83■□□□□ 0.92
PPP1R3F-203ENST00000466508 RPS17P08708 135 aaKnown RBP20.83■□□□□ 0.92
PPP1R3F-203ENST00000466508 ESRRAP11474 423 aaPredicted RBP20.83■□□□□ 0.92
PPP1R3F-203ENST00000466508 NCF1P14598 390 aaPredicted RBP20.83■□□□□ 0.92
PPP1R3F-203ENST00000466508 TSPAN8P19075 237 aa20.83■□□□□ 0.92
PPP1R3F-203ENST00000466508 EPHA3P29320 983 aa20.83■□□□□ 0.92
PPP1R3F-203ENST00000466508 ARHGAP8P85298 464 aa20.83■□□□□ 0.92
PPP1R3F-203ENST00000466508 COL19A1Q14993 1142 aa20.83■□□□□ 0.92
PPP1R3F-203ENST00000466508 ACAD11Q709F0 780 aa20.83■□□□□ 0.92
PPP1R3F-203ENST00000466508 FRA10AC1Q70Z53 315 aa20.83■□□□□ 0.92
PPP1R3F-203ENST00000466508 MMAAQ8IVH4 418 aaKnown RBP20.83■□□□□ 0.92
PPP1R3F-203ENST00000466508 PPP1R36Q96LQ0 422 aa20.83■□□□□ 0.92
PPP1R3F-203ENST00000466508 VPS35Q96QK1 796 aa20.83■□□□□ 0.92
PPP1R3F-203ENST00000466508 CD274Q9NZQ7 290 aa20.83■□□□□ 0.92
PPP1R3F-203ENST00000466508 GOLGA8QA0A0J9YX86 632 aa20.82■□□□□ 0.92
PPP1R3F-203ENST00000466508 GOLGA8OA6NCC3 632 aa20.82■□□□□ 0.92
PPP1R3F-203ENST00000466508 E9PBE3 544 aa20.82■□□□□ 0.92
PPP1R3F-203ENST00000466508 GOLGA8NF8WBI6 632 aa20.82■□□□□ 0.92
PPP1R3F-203ENST00000466508 KLHL41O60662 606 aa20.82■□□□□ 0.92
PPP1R3F-203ENST00000466508 CBSLP0DN79 551 aa20.82■□□□□ 0.92
PPP1R3F-203ENST00000466508 PTPN4P29074 926 aa20.82■□□□□ 0.92
PPP1R3F-203ENST00000466508 CBSP35520 551 aa20.82■□□□□ 0.92
PPP1R3F-203ENST00000466508 HTR4Q13639 388 aa20.82■□□□□ 0.92
PPP1R3F-203ENST00000466508 ENPP2Q13822 863 aa20.82■□□□□ 0.92
PPP1R3F-203ENST00000466508 PPP1R3AQ16821 1122 aa20.82■□□□□ 0.92
PPP1R3F-203ENST00000466508 ANKS6Q68DC2 871 aa20.82■□□□□ 0.92
PPP1R3F-203ENST00000466508 CYP2U1Q7Z449 544 aa20.82■□□□□ 0.92
PPP1R3F-203ENST00000466508 AP2M1Q96CW1 435 aa20.82■□□□□ 0.92
PPP1R3F-203ENST00000466508 DTD2Q96FN9 168 aa20.82■□□□□ 0.92
PPP1R3F-203ENST00000466508 COQ10AQ96MF6 247 aa20.82■□□□□ 0.92
PPP1R3F-203ENST00000466508 FBRSL1Q9HCM7 1045 aaKnown RBP20.82■□□□□ 0.92
PPP1R3F-203ENST00000466508 SLC40A1Q9NP59 571 aa20.82■□□□□ 0.92
PPP1R3F-203ENST00000466508 TSR3Q9UJK0 312 aaKnown RBP20.82■□□□□ 0.92
PPP1R3F-203ENST00000466508 TRAF6Q9Y4K3 522 aa20.82■□□□□ 0.92
PPP1R3F-203ENST00000466508 CDK14O94921 469 aa20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 ENO1P06733 434 aaKnown RBP20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 NCF2P19878 526 aaPredicted RBP20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 SOX9P48436 509 aa20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 SH3BP2P78314 561 aa20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 LCP2Q13094 533 aa20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 LSM12Q3MHD2 195 aaKnown RBP20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 ERN2Q76MJ5 926 aaKnown RBP20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 DET1Q7L5Y6 550 aa20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 BTN2A2Q8WVV5 523 aa20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 MAELQ96JY0 434 aaKnown RBP20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 NSUN5Q96P11 429 aaKnown RBP20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 CCDC28BQ9BUN5 200 aa20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 FAM126AQ9BYI3 521 aaPredicted RBP20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 UTP6Q9NYH9 597 aaKnown RBP20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 MBD1Q9UIS9 605 aaPredicted RBP20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 FIS1Q9Y3D6 152 aa20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 STON1Q9Y6Q2 735 aa20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 ATG2BQ96BY7 2078 aa20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 EIF3FO00303 357 aaPredicted RBP20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 POU3F3P20264 500 aaPredicted RBP20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 CCR7P32248 378 aa20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 AGTR2P50052 363 aa20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 SATB1Q01826 763 aa20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 CLCQ05315 142 aa20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 HDAC8Q9BY41 377 aa20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 TAGLN3Q9UI15 199 aa20.81■□□□□ 0.92
PPP1R3F-203ENST00000466508 ANHXE9PGG2 379 aa20.8■□□□□ 0.92
PPP1R3F-203ENST00000466508 PLK4O00444 970 aa20.8■□□□□ 0.92
PPP1R3F-203ENST00000466508 RAD51BO15315 384 aa20.8■□□□□ 0.92
PPP1R3F-203ENST00000466508 MTX2O75431 263 aa20.8■□□□□ 0.92
PPP1R3F-203ENST00000466508 SKAP2O75563 359 aaPredicted RBP20.8■□□□□ 0.92
PPP1R3F-203ENST00000466508 AP2A2O94973 939 aa20.8■□□□□ 0.92
PPP1R3F-203ENST00000466508 ENO3P13929 434 aaPredicted RBP20.8■□□□□ 0.92
PPP1R3F-203ENST00000466508 MSH3P20585 1137 aa20.8■□□□□ 0.92
PPP1R3F-203ENST00000466508 AOAHP28039 575 aa20.8■□□□□ 0.92
PPP1R3F-203ENST00000466508 PSMD8P48556 350 aa20.8■□□□□ 0.92
PPP1R3F-203ENST00000466508 BTKQ06187 659 aa20.8■□□□□ 0.92
PPP1R3F-203ENST00000466508 KHDC1Q4VXA5 237 aaKnown RBP20.8■□□□□ 0.92
PPP1R3F-203ENST00000466508 FBXO48Q5FWF7 155 aa20.8■□□□□ 0.92
PPP1R3F-203ENST00000466508 LDLRAP1Q5SW96 308 aa20.8■□□□□ 0.92
PPP1R3F-203ENST00000466508 SUGP1Q8IWZ8 645 aaKnown RBP20.8■□□□□ 0.92
PPP1R3F-203ENST00000466508 CHPFQ8IZ52 775 aa20.8■□□□□ 0.92
PPP1R3F-203ENST00000466508 ZNF483Q8TF39 744 aaPredicted RBP20.8■□□□□ 0.92
PPP1R3F-203ENST00000466508 GLYATL1Q969I3 302 aa20.8■□□□□ 0.92
PPP1R3F-203ENST00000466508 MEAF6Q9HAF1 191 aa20.8■□□□□ 0.92
PPP1R3F-203ENST00000466508 MID1IP1Q9NPA3 183 aa20.8■□□□□ 0.92
PPP1R3F-203ENST00000466508 PCTPQ9UKL6 214 aa20.8■□□□□ 0.92
PPP1R3F-203ENST00000466508 OARD1Q9Y530 152 aa20.8■□□□□ 0.92
PPP1R3F-203ENST00000466508 SDHDO14521 159 aa20.79■□□□□ 0.92
PPP1R3F-203ENST00000466508 NPC1O15118 1278 aa20.79■□□□□ 0.92
PPP1R3F-203ENST00000466508 FFAR2O15552 330 aa20.79■□□□□ 0.92
PPP1R3F-203ENST00000466508 RASSF9O75901 435 aa20.79■□□□□ 0.92
PPP1R3F-203ENST00000466508 FGF4P08620 206 aa20.79■□□□□ 0.92
PPP1R3F-203ENST00000466508 KRT16P08779 473 aa20.79■□□□□ 0.92
PPP1R3F-203ENST00000466508 INHBCP55103 352 aa20.79■□□□□ 0.92
PPP1R3F-203ENST00000466508 GBX1Q14549 363 aa20.79■□□□□ 0.92
PPP1R3F-203ENST00000466508 E2F5Q15329 346 aa20.79■□□□□ 0.92
PPP1R3F-203ENST00000466508 CCDC85BQ15834 202 aaPredicted RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms