RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 E2F1Q01094 437 aa11.45□□□□□ -0.58
CUX1-207ENST00000465461 SLC7A5Q01650 507 aa11.45□□□□□ -0.58
CUX1-207ENST00000465461 CKAP4Q07065 602 aaKnown RBP11.45□□□□□ -0.58
CUX1-207ENST00000465461 TARDBPQ13148 414 aaKnown RBP eCLIP11.45□□□□□ -0.58
CUX1-207ENST00000465461 BIRC2Q13490 618 aa11.45□□□□□ -0.58
CUX1-207ENST00000465461 BRD3Q15059 726 aa11.45□□□□□ -0.58
CUX1-207ENST00000465461 AMZ1Q400G9 498 aa11.45□□□□□ -0.58
CUX1-207ENST00000465461 ANKRD20A4Q4UJ75 823 aa11.45□□□□□ -0.58
CUX1-207ENST00000465461 BCL7AQ4VC05 210 aa11.45□□□□□ -0.58
CUX1-207ENST00000465461 TMPRSS7Q7RTY8 843 aa11.45□□□□□ -0.58
CUX1-207ENST00000465461 SPNS2Q8IVW8 549 aa11.45□□□□□ -0.58
CUX1-207ENST00000465461 SFRP1Q8N474 314 aa11.45□□□□□ -0.58
CUX1-207ENST00000465461 SPDYE1Q8NFV5 336 aaPredicted RBP11.45□□□□□ -0.58
CUX1-207ENST00000465461 LKAAEAR1Q8TD35 194 aa11.45□□□□□ -0.58
CUX1-207ENST00000465461 JPH3Q8WXH2 748 aaPredicted RBP11.45□□□□□ -0.58
CUX1-207ENST00000465461 PEX13Q92968 403 aa11.45□□□□□ -0.58
CUX1-207ENST00000465461 NAT6Q93015 286 aa11.45□□□□□ -0.58
CUX1-207ENST00000465461 SNF8Q96H20 258 aa11.45□□□□□ -0.58
CUX1-207ENST00000465461 LRRC1Q9BTT6 524 aa11.45□□□□□ -0.58
CUX1-207ENST00000465461 WWP1Q9H0M0 922 aa11.45□□□□□ -0.58
CUX1-207ENST00000465461 ZNF624Q9P2J8 865 aaPredicted RBP11.45□□□□□ -0.58
CUX1-207ENST00000465461 ANAPC5Q9UJX4 755 aa11.45□□□□□ -0.58
CUX1-207ENST00000465461 ANGPTL2Q9UKU9 493 aa11.45□□□□□ -0.58
CUX1-207ENST00000465461 MRFAP1Q9Y605 127 aa11.45□□□□□ -0.58
CUX1-207ENST00000465461 CFAP20Q9Y6A4 193 aaKnown RBP11.45□□□□□ -0.58
CUX1-207ENST00000465461 RPS6KL1Q9Y6S9 549 aa11.45□□□□□ -0.58
CUX1-207ENST00000465461 SPEGQ15772 3267 aa11.45□□□□□ -0.58
CUX1-207ENST00000465461 ZCWPW2A0A1B0GU75 182 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 FAM237BA0A1B0GVD1 139 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 FAM187AA6NFU0 413 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 MGAT4DA6NG13 374 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 NUDT21O43809 227 aaKnown RBP11.44□□□□□ -0.58
CUX1-207ENST00000465461 VCLP18206 1134 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 SLC19A1P41440 591 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 NSG1P42857 185 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 PREPP48147 710 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 CSE1LP55060 971 aaKnown RBP11.44□□□□□ -0.58
CUX1-207ENST00000465461 HHEXQ03014 270 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 ITIH4Q14624 930 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 MORF4L2Q15014 288 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 CDCP2Q5VXM1 449 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 DUS1LQ6P1R4 473 aaKnown RBP11.44□□□□□ -0.58
CUX1-207ENST00000465461 ABRAXAS1Q6UWZ7 409 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 USP53Q70EK8 1073 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 ZNF572Q7Z3I7 529 aaPredicted RBP11.44□□□□□ -0.58
CUX1-207ENST00000465461 TMPRSS9Q7Z410 1059 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 SPRED1Q7Z699 444 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 HOOK3Q86VS8 718 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 CCNJLQ8IV13 435 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 ANKMY2Q8IV38 441 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 KRT222Q8N1A0 295 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 OR2L2Q8NH16 312 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 HEXDCQ8WVB3 486 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.44□□□□□ -0.58
CUX1-207ENST00000465461 STAMBPL1Q96FJ0 436 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 ZNF514Q96K75 400 aaPredicted RBP11.44□□□□□ -0.58
CUX1-207ENST00000465461 WDR83Q9BRX9 315 aaKnown RBP11.44□□□□□ -0.58
CUX1-207ENST00000465461 ERP44Q9BS26 406 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 CCM2Q9BSQ5 444 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 TBC1D10AQ9BXI6 508 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 LRRN3Q9H3W5 708 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 RDH14Q9HBH5 336 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 CPNE7Q9UBL6 633 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 CLCA2Q9UQC9 943 aa11.44□□□□□ -0.58
CUX1-207ENST00000465461 DNMT3AQ9Y6K1 912 aaPredicted RBP11.44□□□□□ -0.58
CUX1-207ENST00000465461 COL27A1Q8IZC6 1860 aaPredicted RBP11.43□□□□□ -0.58
CUX1-207ENST00000465461 MAGEB16A2A368 324 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 NDUFS3O75489 264 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 USP1O94782 785 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 MPSTP25325 297 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 PDHA2P29803 388 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 ELK3P41970 407 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 MAPK9P45984 424 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 PPM1FP49593 454 aaPredicted RBP11.43□□□□□ -0.58
CUX1-207ENST00000465461 DMPKQ09013 629 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 CTBP1Q13363 440 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 FASTKD3Q14CZ7 662 aaKnown RBP11.43□□□□□ -0.58
CUX1-207ENST00000465461 RPE65Q16518 533 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 WHAMMP3Q1A5X7 153 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 ZNF789Q5FWF6 425 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.43□□□□□ -0.58
CUX1-207ENST00000465461 LYPLAL1Q5VWZ2 237 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 METRNLQ641Q3 311 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 DUPD1Q68J44 220 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 KIAA0930Q6ICG6 404 aaPredicted RBP11.43□□□□□ -0.58
CUX1-207ENST00000465461 PACS1Q6VY07 963 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 CCNI2Q6ZMN8 369 aaPredicted RBP11.43□□□□□ -0.58
CUX1-207ENST00000465461 MAATS1Q7Z4T9 603 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 B3GNT8Q7Z7M8 397 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 TMEM135Q86UB9 458 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 SLC9B2Q86UD5 537 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 TMPRSS12Q86WS5 348 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 DENND6AQ8IWF6 608 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 GALNT15Q8N3T1 639 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 NOA1Q8NC60 698 aaKnown RBP11.43□□□□□ -0.58
CUX1-207ENST00000465461 GPR150Q8NGU9 434 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 KIF18AQ8NI77 898 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 ELMO1Q92556 727 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 CFAP36Q96G28 342 aa11.43□□□□□ -0.58
CUX1-207ENST00000465461 SGSM3Q96HU1 749 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 234.1 ms