RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 PREPP48147 710 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 SIM1P81133 766 aaPredicted RBP11.68□□□□□ -0.54
APTX-213ENST00000465003 TRIP6Q15654 476 aaKnown RBP11.68□□□□□ -0.54
APTX-213ENST00000465003 LONRF1Q17RB8 773 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 C6orf132Q5T0Z8 1188 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 NEPROQ6NW34 567 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 GUSBP11Q6P575 273 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 XKR5Q6UX68 686 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 CENPUQ71F23 418 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 GKN2Q86XP6 184 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 NAGSQ8N159 534 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 BBOF1Q8ND07 529 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 BAHD1Q8TBE0 780 aaPredicted RBP11.68□□□□□ -0.54
APTX-213ENST00000465003 DTX3LQ8TDB6 740 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 SEC14L1Q92503 715 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 ATXN7L3BQ96GX2 97 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 GSDMCQ9BYG8 508 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 RABGEF1Q9UJ41 708 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 NFU1Q9UMS0 254 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 PCDHGB2Q9Y5G2 931 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 IGLV3-16A0A075B6K0 115 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 PDZK1P1A8MUH7 402 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 E7ESA3 106 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 AGRPO00253 132 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 KMOO15229 486 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 PAMP19021 973 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 FMO4P31512 558 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 DAB2P98082 770 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 THOC5Q13769 683 aaKnown RBP11.68□□□□□ -0.54
APTX-213ENST00000465003 DUS1LQ6P1R4 473 aaKnown RBP11.68□□□□□ -0.54
APTX-213ENST00000465003 MARCH9Q86YJ5 346 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 CILP2Q8IUL8 1156 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 FSTL5Q8N475 847 aaPredicted RBP11.68□□□□□ -0.54
APTX-213ENST00000465003 ZDHHC1Q8WTX9 485 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 PEX13Q92968 403 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.68□□□□□ -0.54
APTX-213ENST00000465003 TOR4AQ9NXH8 423 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 DLL3Q9NYJ7 618 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 FAM169AQ9Y6X4 670 aa11.68□□□□□ -0.54
APTX-213ENST00000465003 BHMG1C9JSJ3 638 aaPredicted RBP11.67□□□□□ -0.54
APTX-213ENST00000465003 CFAP99D6REC4 459 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 NOBOXO60393 691 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 NIPSNAP2O75323 286 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 NDUFS3O75489 264 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 KCNK5O95279 499 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 TRIM16O95361 564 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 LDOC1O95751 146 aaPredicted RBP11.67□□□□□ -0.54
APTX-213ENST00000465003 MYBL2P10244 700 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 RALBP11234 206 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 BRAFP15056 766 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 NSG1P42857 185 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 PRLHRP49683 370 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 BOP1Q14137 746 aaKnown RBP11.67□□□□□ -0.54
APTX-213ENST00000465003 EFTUD2Q15029 972 aaKnown RBP eCLIP11.67□□□□□ -0.54
APTX-213ENST00000465003 PROX2Q3B8N5 592 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 CTSL3PQ5NE16 218 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 PERM1Q5SV97 790 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 SLCO6A1Q86UG4 719 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 AMZ2Q86W34 360 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 CFAP206Q8IYR0 622 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 PYROXD1Q8WU10 500 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 JPH3Q8WXH2 748 aaPredicted RBP11.67□□□□□ -0.54
APTX-213ENST00000465003 CERS2Q96G23 380 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 NRTNQ99748 197 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 RMI1Q9H9A7 625 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 SMYD2Q9NRG4 433 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 GALPQ9UBC7 116 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 PSAT1Q9Y617 370 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 FRYQ5TBA9 3013 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 MAGEB16A2A368 324 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 HAUS5O94927 633 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 TOP3BO95985 862 aaKnown RBP11.67□□□□□ -0.54
APTX-213ENST00000465003 ALPPL2P10696 532 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 PDHA2P29803 388 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 ID4P47928 161 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 GPX6P59796 221 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 PPM1JQ5JR12 505 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 ZCCHC8Q6NZY4 707 aaKnown RBP11.67□□□□□ -0.54
APTX-213ENST00000465003 CNSTQ6PJW8 725 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 SLC37A2Q8TED4 501 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 NDNQ99608 321 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 C19orf43Q9BQ61 176 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 SYNDIG1Q9H7V2 258 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 SARS2Q9NP81 518 aaKnown RBP11.67□□□□□ -0.54
APTX-213ENST00000465003 CSNK1G3Q9Y6M4 447 aa11.67□□□□□ -0.54
APTX-213ENST00000465003 SMAPO00193 183 aa11.66□□□□□ -0.54
APTX-213ENST00000465003 FAM153BP0C7A2 387 aa11.66□□□□□ -0.54
APTX-213ENST00000465003 GABRB3P28472 473 aa11.66□□□□□ -0.54
APTX-213ENST00000465003 MAGEA4P43358 317 aa11.66□□□□□ -0.54
APTX-213ENST00000465003 TTPAP49638 278 aa11.66□□□□□ -0.54
APTX-213ENST00000465003 CLCNKAP51800 687 aa11.66□□□□□ -0.54
APTX-213ENST00000465003 LRP8Q14114 963 aa11.66□□□□□ -0.54
APTX-213ENST00000465003 NAA30Q147X3 362 aaPredicted RBP11.66□□□□□ -0.54
APTX-213ENST00000465003 CLCA4Q14CN2 919 aa11.66□□□□□ -0.54
APTX-213ENST00000465003 TYSND1Q2T9J0 566 aa11.66□□□□□ -0.54
APTX-213ENST00000465003 FAM153CQ494X1 144 aa11.66□□□□□ -0.54
APTX-213ENST00000465003 GLE1Q53GS7 698 aaKnown RBP11.66□□□□□ -0.54
APTX-213ENST00000465003 SPANXN3Q5MJ09 141 aa11.66□□□□□ -0.54
APTX-213ENST00000465003 MRNIPQ6NTE8 343 aa11.66□□□□□ -0.54
APTX-213ENST00000465003 PALM2Q8IXS6 379 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms