RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 PPHLN1Q8NEY8 458 aaKnown RBP16.75■□□□□ 0.27
VPS52-215ENST00000464425 OR13J1Q8NGT2 312 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 MDM1Q8TC05 714 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 HDAC10Q969S8 669 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 ATXN7L3BQ96GX2 97 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 SERPINB12Q96P63 405 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 COPS8Q99627 209 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 TRIM31Q9BZY9 425 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 CHRAC1Q9NRG0 131 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 SCHIP1Q9P0W5 487 aaPredicted RBP16.75■□□□□ 0.27
VPS52-215ENST00000464425 ANAPC5Q9UJX4 755 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 UNC13CQ8NB66 2214 aa16.75■□□□□ 0.27
VPS52-215ENST00000464425 ZFC3H1O60293 1989 aaKnown RBP16.75■□□□□ 0.27
VPS52-215ENST00000464425 IGF2RP11717 2491 aa16.74■□□□□ 0.27
VPS52-215ENST00000464425 ZNF106Q9H2Y7 1883 aaKnown RBP16.74■□□□□ 0.27
VPS52-215ENST00000464425 BHMG1C9JSJ3 638 aaPredicted RBP16.74■□□□□ 0.27
VPS52-215ENST00000464425 RALBP11234 206 aa16.74■□□□□ 0.27
VPS52-215ENST00000464425 IDSP22304 550 aa16.74■□□□□ 0.27
VPS52-215ENST00000464425 ACRV1P26436 265 aa16.74■□□□□ 0.27
VPS52-215ENST00000464425 MGAT1P26572 445 aa16.74■□□□□ 0.27
VPS52-215ENST00000464425 MAGEA3P43357 314 aa16.74■□□□□ 0.27
VPS52-215ENST00000464425 ITGA8P53708 1063 aa16.74■□□□□ 0.27
VPS52-215ENST00000464425 CALCOCO2Q13137 446 aa16.74■□□□□ 0.27
VPS52-215ENST00000464425 CBLBQ13191 982 aa16.74■□□□□ 0.27
VPS52-215ENST00000464425 PCID2Q5JVF3 399 aa16.74■□□□□ 0.27
VPS52-215ENST00000464425 NKAIN2Q5VXU1 208 aa16.74■□□□□ 0.27
VPS52-215ENST00000464425 FAM83HQ6ZRV2 1179 aaPredicted RBP16.74■□□□□ 0.27
VPS52-215ENST00000464425 USP53Q70EK8 1073 aa16.74■□□□□ 0.27
VPS52-215ENST00000464425 NLRP9Q7RTR0 991 aa16.74■□□□□ 0.27
VPS52-215ENST00000464425 ZCCHC14Q8WYQ9 949 aaKnown RBP16.74■□□□□ 0.27
VPS52-215ENST00000464425 PEX13Q92968 403 aa16.74■□□□□ 0.27
VPS52-215ENST00000464425 SLC38A3Q99624 504 aa16.74■□□□□ 0.27
VPS52-215ENST00000464425 FOXP3Q9BZS1 431 aa16.74■□□□□ 0.27
VPS52-215ENST00000464425 CCDC86Q9H6F5 360 aaKnown RBP16.74■□□□□ 0.27
VPS52-215ENST00000464425 ZDHHC3Q9NYG2 299 aa16.74■□□□□ 0.27
VPS52-215ENST00000464425 FAM8A1Q9UBU6 413 aa16.74■□□□□ 0.27
VPS52-215ENST00000464425 RIMKLBQ9ULI2 386 aa16.74■□□□□ 0.27
VPS52-215ENST00000464425 AK5Q9Y6K8 562 aa16.74■□□□□ 0.27
VPS52-215ENST00000464425 BPTFQ12830 3046 aa16.74■□□□□ 0.27
VPS52-215ENST00000464425 MAP1BP46821 2468 aaKnown RBP16.73■□□□□ 0.27
VPS52-215ENST00000464425 TRBV5-4A0A0C4DH59 114 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 MAGEB16A2A368 324 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 PRR19A6NJB7 356 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 SDR42E2A6NKP2 422 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 OR5K4A6NMS3 321 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 D6RAR5 112 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 CFAP99D6REC4 459 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 SGTAO43765 313 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 AVILO75366 819 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 GOT2P00505 430 aaKnown RBP16.73■□□□□ 0.27
VPS52-215ENST00000464425 ATP1B2P14415 290 aaPredicted RBP16.73■□□□□ 0.27
VPS52-215ENST00000464425 SLC2A4P14672 509 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 GPR3P46089 330 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 FASLGP48023 281 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 PPM1FP49593 454 aaPredicted RBP16.73■□□□□ 0.27
VPS52-215ENST00000464425 PDX1P52945 283 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 TUBB4BP68371 445 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 SLC7A5Q01650 507 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 HHEXQ03014 270 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 CAV1Q03135 178 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 NFE2L1Q14494 772 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 NR1D2Q14995 579 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 DBN1Q16643 649 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 B3GNT8Q7Z7M8 397 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 SLC9B2Q86UD5 537 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 KDF1Q8NAX2 398 aaPredicted RBP16.73■□□□□ 0.27
VPS52-215ENST00000464425 OR6P1Q8NGX9 317 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 ART4Q93070 314 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 ZNF514Q96K75 400 aaPredicted RBP16.73■□□□□ 0.27
VPS52-215ENST00000464425 RDH14Q9HBH5 336 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 SARS2Q9NP81 518 aaKnown RBP16.73■□□□□ 0.27
VPS52-215ENST00000464425 KCNK4Q9NYG8 393 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 GRHL1Q9NZI5 618 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 CPNE7Q9UBL6 633 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 WDR37Q9Y2I8 494 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 ENTPD2Q9Y5L3 495 aa16.73■□□□□ 0.27
VPS52-215ENST00000464425 DNMT3AQ9Y6K1 912 aaPredicted RBP16.73■□□□□ 0.27
VPS52-215ENST00000464425 KIR2DS5A0A0G2JLQ3 304 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 A0A0G2JNG1 304 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 OR52A4PA6NMU1 304 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 GOLGA8MH3BSY2 632 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 KIR2DS3K7RE56 304 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 AGRPO00253 132 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 ZW10O43264 779 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 KCNJ13O60928 360 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 CAPNS1P04632 268 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 MPOP05164 745 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 BRAFP15056 766 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 CD1CP29017 333 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 FOXN2P32314 431 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 PRAMEP78395 509 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 KIR2DS5Q14953 304 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 CLCA4Q14CN2 919 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 ST3GAL2Q16842 350 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.72■□□□□ 0.27
VPS52-215ENST00000464425 ABRAXAS1Q6UWZ7 409 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 TMPRSS9Q7Z410 1059 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 CLDN19Q8N6F1 224 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 HEXDCQ8WVB3 486 aa16.72■□□□□ 0.27
VPS52-215ENST00000464425 KIFC1Q9BW19 673 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms