RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 GPIP06744 558 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 DDX5P17844 614 aaKnown RBP8.97□□□□□ -0.97
HPS4-208ENST00000464362 HOXA11P31270 313 aaPredicted RBP8.97□□□□□ -0.97
HPS4-208ENST00000464362 PIGFQ07326 219 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 ZNF697Q5TEC3 545 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 SLC24A5Q71RS6 500 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 UBE2J2Q8N2K1 259 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 ARL14EPQ8N8R7 260 aaPredicted RBP8.97□□□□□ -0.97
HPS4-208ENST00000464362 ST13P5Q8NFI4 369 aaPredicted RBP8.97□□□□□ -0.97
HPS4-208ENST00000464362 SPPL2BQ8TCT7 592 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 EEF1AKMT1Q8WVE0 214 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 C17orf50Q8WW18 174 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 BRD9Q9H8M2 597 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 CTPS2Q9NRF8 586 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 IFT80Q9P2H3 777 aaPredicted RBP8.97□□□□□ -0.97
HPS4-208ENST00000464362 CDV3Q9UKY7 258 aaKnown RBP8.97□□□□□ -0.97
HPS4-208ENST00000464362 NUP205Q92621 2012 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 LAMB4A4D0S4 1761 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 A0A0D9SEW6 157 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 GLYATL1P3A0A0U1RQE8 302 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 LSM1O15116 133 aaKnown RBP8.97□□□□□ -0.97
HPS4-208ENST00000464362 SCAMP1O15126 338 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 FFAR2O15552 330 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 CLDN11O75508 207 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 PRKD3O94806 890 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 IFNA14P01570 189 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 JUNP05412 331 aaKnown RBP8.97□□□□□ -0.97
HPS4-208ENST00000464362 DHRS4L1P0CG22 281 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 RPL10P27635 214 aaKnown RBP8.97□□□□□ -0.97
HPS4-208ENST00000464362 CAPGP40121 348 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 SNRPD1P62314 119 aaKnown RBP8.97□□□□□ -0.97
HPS4-208ENST00000464362 EPS8Q12929 822 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 PDZK1Q5T2W1 519 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 SPATA19Q7Z5L4 167 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 TMPRSS11BQ86T26 416 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 AHI1Q8N157 1196 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 AMER2Q8N7J2 671 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 VANGL1Q8TAA9 524 aaPredicted RBP8.97□□□□□ -0.97
HPS4-208ENST00000464362 PROX1Q92786 737 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 CDK5RAP1Q96SZ6 601 aaKnown RBP8.97□□□□□ -0.97
HPS4-208ENST00000464362 MAP10Q9P2G4 905 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 ATP6V1HQ9UI12 483 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 BTBD3Q9Y2F9 522 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 WNK3Q9BYP7 1800 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 TAF4O00268 1085 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 PIRO00625 290 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 SERPINA1P01009 418 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 TRBC1P01850 177 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 ZNF182P17025 639 aaPredicted RBP8.97□□□□□ -0.97
HPS4-208ENST00000464362 ARHGAP15Q53QZ3 475 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 DDI2Q5TDH0 399 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 FBXL19Q6PCT2 694 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 RNF19BQ6ZMZ0 732 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 TMEM135Q86UB9 458 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 KBTBD7Q8WVZ9 684 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 SLC13A3Q8WWT9 602 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 IRGQQ8WZA9 623 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 CHCHD6Q9BRQ6 235 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 OSBPL6Q9BZF3 934 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 NSUN3Q9H649 340 aaKnown RBP8.97□□□□□ -0.97
HPS4-208ENST00000464362 SMURF2Q9HAU4 748 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 KLHL1Q9NR64 748 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 HECAQ9UBI9 543 aaPredicted RBP8.97□□□□□ -0.97
HPS4-208ENST00000464362 KLHL3Q9UH77 587 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 KLHL20Q9Y2M5 609 aa8.97□□□□□ -0.97
HPS4-208ENST00000464362 MRPS7Q9Y2R9 242 aaKnown RBP8.97□□□□□ -0.97
HPS4-208ENST00000464362 CAB39Q9Y376 341 aaPredicted RBP8.97□□□□□ -0.97
HPS4-208ENST00000464362 F5P12259 2224 aa8.96□□□□□ -0.97
HPS4-208ENST00000464362 UPK3BL1B0FP48 263 aa8.96□□□□□ -0.97
HPS4-208ENST00000464362 UPK3BL2E5RIL1 263 aa8.96□□□□□ -0.97
HPS4-208ENST00000464362 OR10H3O60404 316 aa8.96□□□□□ -0.97
HPS4-208ENST00000464362 GJA1P17302 382 aa8.96□□□□□ -0.97
HPS4-208ENST00000464362 GKP32189 559 aa8.96□□□□□ -0.97
HPS4-208ENST00000464362 CTSKP43235 329 aa8.96□□□□□ -0.97
HPS4-208ENST00000464362 CHIT1Q13231 466 aa8.96□□□□□ -0.97
HPS4-208ENST00000464362 MYLK3Q32MK0 819 aa8.96□□□□□ -0.97
HPS4-208ENST00000464362 RFX4Q33E94 735 aa8.96□□□□□ -0.97
HPS4-208ENST00000464362 PROSER1Q86XN7 944 aa8.96□□□□□ -0.97
HPS4-208ENST00000464362 CAMKK1Q8N5S9 505 aa8.96□□□□□ -0.97
HPS4-208ENST00000464362 CENPIQ92674 756 aaPredicted RBP8.96□□□□□ -0.97
HPS4-208ENST00000464362 ROPN1LQ96C74 230 aa8.96□□□□□ -0.97
HPS4-208ENST00000464362 ITCHQ96J02 903 aa8.96□□□□□ -0.97
HPS4-208ENST00000464362 OLFM1Q99784 485 aa8.96□□□□□ -0.97
HPS4-208ENST00000464362 GDAP2Q9NXN4 497 aa8.96□□□□□ -0.97
HPS4-208ENST00000464362 PDE10AQ9Y233 779 aa8.96□□□□□ -0.97
HPS4-208ENST00000464362 PRORSD1PA6NEY8 169 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 ARVCFO00192 962 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 SLC28A1O00337 649 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 MYL12BO14950 172 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 SUV39H1O43463 412 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 HTRA2O43464 458 aaPredicted RBP8.96□□□□□ -0.98
HPS4-208ENST00000464362 OR1I1O60431 355 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 SNNO75324 88 aaPredicted RBP8.96□□□□□ -0.98
HPS4-208ENST00000464362 OPN1SWP03999 348 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 PFKMP08237 780 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 G6PDP11413 515 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 GK3PQ14409 553 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 GDF6Q6KF10 455 aaPredicted RBP8.96□□□□□ -0.98
HPS4-208ENST00000464362 TAPT1Q6NXT6 567 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 FUT10Q6P4F1 479 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms