RNA–Protein interactions for RNA: ENST00000464138.1

SSR3-203, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 533 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-203ENST00000464138 CLEC3BP05452 202 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 PROS1P07225 676 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 SLC11A1P49279 550 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 GPC3P51654 580 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 HMGA2P52926 109 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 LIMK1P53667 647 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 CYP4A11Q02928 519 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 FOXD4Q12950 439 aaPredicted RBP5.96□□□□□ -1.46
SSR3-203ENST00000464138 DAZAP2Q15038 168 aaPredicted RBP5.96□□□□□ -1.46
SSR3-203ENST00000464138 MLF2Q15773 248 aaPredicted RBP5.96□□□□□ -1.46
SSR3-203ENST00000464138 KRTAP15-1Q3LI76 137 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 UBAP2Q5T6F2 1119 aaKnown RBP5.96□□□□□ -1.46
SSR3-203ENST00000464138 NCAPH2Q6IBW4 605 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 CWC27Q6UX04 472 aaKnown RBP5.96□□□□□ -1.46
SSR3-203ENST00000464138 NEK10Q6ZWH5 1172 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 CPLX4Q7Z7G2 160 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 TADA2BQ86TJ2 420 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 TMC8Q8IU68 726 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 CCDC60Q8IWA6 550 aaPredicted RBP5.96□□□□□ -1.46
SSR3-203ENST00000464138 DPP10Q8N608 796 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 PLD5Q8N7P1 536 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 ZMIZ2Q8NF64 920 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 CTCFLQ8NI51 663 aaPredicted RBP5.96□□□□□ -1.46
SSR3-203ENST00000464138 TMEM170AQ8WVE7 144 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 KLHL29Q96CT2 875 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 TIGD1Q96MW7 591 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 SCNM1Q9BWG6 230 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 NT5C3AQ9H0P0 336 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 ZNF304Q9HCX3 659 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 LTB4R2Q9NPC1 389 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 KRT84Q9NSB2 600 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 DIAPH3Q9NSV4 1193 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 DNAJB4Q9UDY4 337 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 UTS2RQ9UKP6 389 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 MTF2Q9Y483 593 aaPredicted RBP5.96□□□□□ -1.46
SSR3-203ENST00000464138 CNTNAP2Q9UHC6 1331 aa5.96□□□□□ -1.46
SSR3-203ENST00000464138 ARHGEF17Q96PE2 2063 aaPredicted RBP5.95□□□□□ -1.46
SSR3-203ENST00000464138 TARSL2A2RTX5 802 aaKnown RBP5.95□□□□□ -1.46
SSR3-203ENST00000464138 RBMXL2O75526 392 aaKnown RBP5.95□□□□□ -1.46
SSR3-203ENST00000464138 CALM1P0DP23 149 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 CALM2P0DP24 149 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 CALM3P0DP25 149 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 TDGF1P13385 188 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 CD72P21854 359 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 POLD2P49005 469 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 GLUD2P49448 558 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 CLCN3P51790 818 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 RPL7AP62424 266 aaKnown RBP5.95□□□□□ -1.46
SSR3-203ENST00000464138 UBE2SQ16763 222 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 MIDNQ504T8 468 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 SERTAD4-AS1Q5TG53 156 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 PAPD7Q5XG87 772 aaKnown RBP5.95□□□□□ -1.46
SSR3-203ENST00000464138 ZNF852Q6ZMS4 543 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 ZNF793Q6ZN11 406 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 KDELC2Q7Z4H8 507 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 MRPL10Q7Z7H8 261 aaKnown RBP5.95□□□□□ -1.46
SSR3-203ENST00000464138 ZDHHC23Q8IYP9 409 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 RNF168Q8IYW5 571 aaPredicted RBP5.95□□□□□ -1.46
SSR3-203ENST00000464138 TMTC2Q8N394 836 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 SLC25A41Q8N5S1 370 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 NCOA7Q8NI08 942 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 URGCPQ8TCY9 931 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 WIPF2Q8TF74 440 aaPredicted RBP5.95□□□□□ -1.46
SSR3-203ENST00000464138 PIBF1Q8WXW3 757 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 FGF14Q92915 247 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 WDR83Q9BRX9 315 aaKnown RBP5.95□□□□□ -1.46
SSR3-203ENST00000464138 GCOM2Q9BZD3 368 aaPredicted RBP5.95□□□□□ -1.46
SSR3-203ENST00000464138 GLT8D2Q9H1C3 349 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.95□□□□□ -1.46
SSR3-203ENST00000464138 NRBP2Q9NSY0 501 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 NLKQ9UBE8 527 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 RALYQ9UKM9 306 aaKnown RBP5.95□□□□□ -1.46
SSR3-203ENST00000464138 CDH7Q9ULB5 785 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 PCDHGB5Q9Y5G0 923 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.95□□□□□ -1.46
SSR3-203ENST00000464138 TDRD15B5MCY1 1934 aaKnown RBP5.95□□□□□ -1.46
SSR3-203ENST00000464138 GREB1Q4ZG55 1949 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 FRYQ5TBA9 3013 aa5.95□□□□□ -1.46
SSR3-203ENST00000464138 SETXQ7Z333 2677 aaKnown RBP5.94□□□□□ -1.46
SSR3-203ENST00000464138 TRBV5-7A0A0A0MS05 114 aa5.94□□□□□ -1.46
SSR3-203ENST00000464138 A0A1W2PQM1 296 aa5.94□□□□□ -1.46
SSR3-203ENST00000464138 TMEM8BA6NDV4 472 aa5.94□□□□□ -1.46
SSR3-203ENST00000464138 PABPN1LA6NDY0 278 aaKnown RBP5.94□□□□□ -1.46
SSR3-203ENST00000464138 FAM157AC9JC47 383 aa5.94□□□□□ -1.46
SSR3-203ENST00000464138 RFPL2O75678 378 aa5.94□□□□□ -1.46
SSR3-203ENST00000464138 SEC14L2O76054 403 aa5.94□□□□□ -1.46
SSR3-203ENST00000464138 DDHD2O94830 711 aa5.94□□□□□ -1.46
SSR3-203ENST00000464138 IRF1P10914 325 aa5.94□□□□□ -1.46
SSR3-203ENST00000464138 POU1F1P28069 291 aa5.94□□□□□ -1.46
SSR3-203ENST00000464138 EPHB2P29323 1055 aa5.94□□□□□ -1.46
SSR3-203ENST00000464138 MPGP29372 298 aa5.94□□□□□ -1.46
SSR3-203ENST00000464138 BSGP35613 385 aa5.94□□□□□ -1.46
SSR3-203ENST00000464138 HARS2P49590 506 aaKnown RBP5.94□□□□□ -1.46
SSR3-203ENST00000464138 ARSFP54793 590 aa5.94□□□□□ -1.46
SSR3-203ENST00000464138 ARF3P61204 181 aaPredicted RBP5.94□□□□□ -1.46
SSR3-203ENST00000464138 ARF1P84077 181 aaKnown RBP5.94□□□□□ -1.46
SSR3-203ENST00000464138 SETQ01105 290 aaPredicted RBP5.94□□□□□ -1.46
SSR3-203ENST00000464138 PDE1CQ14123 709 aaPredicted RBP5.94□□□□□ -1.46
SSR3-203ENST00000464138 ERV3-1Q14264 604 aa5.94□□□□□ -1.46
SSR3-203ENST00000464138 TBCEQ15813 527 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms