RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 RBMXL2O75526 392 aaKnown RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 MOCS3O95396 460 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 KLF8O95600 359 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 NFATC1O95644 943 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 FAM163BP0C2L3 166 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 FAM200BP0CF97 657 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 CSH1P0DML2 217 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 CSH2P0DML3 217 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 GABRG2P18507 467 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 MMP8P22894 467 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 MAGEA1P43355 309 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 IFNAR2P48551 515 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 MARCKSL1P49006 195 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 YWHAEP62258 255 aaKnown RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 TSPY1Q01534 308 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 BNC1Q01954 994 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 BST2Q10589 180 aaKnown RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 MGAT5BQ3V5L5 792 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 CFAP221Q4G0U5 840 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 RAB41Q5JT25 222 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 FAM182AQ5T1J6 154 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 TSTD2Q5T7W7 516 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 SYPL2Q5VXT5 272 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 KIAA0895LQ68EN5 471 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 RHBDF2Q6PJF5 856 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 ANKS1BQ7Z6G8 1248 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 TMPRSS12Q86WS5 348 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 METTL23Q86XA0 190 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 PHF13Q86YI8 300 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 SPATA2LQ8IUW3 424 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 CCAR2Q8N163 923 aaKnown RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 DEFB119Q8N690 84 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 ZNF397Q8NF99 534 aaPredicted RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 SPPL2BQ8TCT7 592 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 SNX19Q92543 992 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 ZNF653Q96CK0 615 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 IQCDQ96DY2 449 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 P2RY11Q96G91 374 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 CCDC42Q96M95 316 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 TRIB1Q96RU8 372 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 C1orf43Q9BWL3 253 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 DUSP16Q9BY84 665 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 LHX5Q9H2C1 402 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 LZTFL1Q9NQ48 299 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 SLC17A6Q9P2U8 582 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 MYO1AQ9UBC5 1043 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 CNOT8Q9UFF9 292 aaKnown RBP3.7□□□□□ -1.82
SCFD1-204ENST00000463622 ARHGAP26Q9UNA1 814 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 DAAM1Q9Y4D1 1078 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 PCDHA3Q9Y5H8 950 aa3.7□□□□□ -1.82
SCFD1-204ENST00000463622 ATXN2Q99700 1313 aaKnown RBP3.69□□□□□ -1.82
SCFD1-204ENST00000463622 USP9XQ93008 2570 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-204ENST00000463622 TRAV19A0A0A6YYK7 116 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 MACROD2A1Z1Q3 448 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 PRSS29PA6NIE9 313 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 ZNF785A8K8V0 405 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 TMEM110-MUSTN1A8MSY1 372 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 TLX3O43711 291 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-204ENST00000463622 RTN2O75298 545 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 KAT7O95251 611 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 TBX18O95935 607 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 CYP1A2P05177 515 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 TPM1P09493 284 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 H2AFZP0C0S5 128 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 HDCP19113 662 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 CHRM3P20309 590 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 LPOP22079 712 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-204ENST00000463622 CCND1P24385 295 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 RFC1P35251 1148 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-204ENST00000463622 GABRB2P47870 512 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 ANXA11P50995 505 aaKnown RBP3.69□□□□□ -1.82
SCFD1-204ENST00000463622 TKTL1P51854 596 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 BCAT1P54687 386 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 DAOAP59103 153 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 TAS2R40P59535 323 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 GRIK2Q13002 908 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 HNRNPA0Q13151 305 aaKnown RBP3.69□□□□□ -1.82
SCFD1-204ENST00000463622 MAMLD1Q13495 774 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 TAF12Q16514 161 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 C15orf59Q2T9L4 293 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-204ENST00000463622 PLEKHG6Q3KR16 790 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 OR6B2Q6IFH4 312 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 PLEKHA7Q6IQ23 1121 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 AADACL2Q6P093 401 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 CYP4V2Q6ZWL3 525 aaPredicted RBP3.69□□□□□ -1.82
SCFD1-204ENST00000463622 H2AFVQ71UI9 128 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 AMIGO2Q86SJ2 522 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 TMEM110Q86TL2 294 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 ZNF677Q86XU0 584 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 CCDC170Q8IYT3 715 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 THEM5Q8N1Q8 247 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 SPATA18Q8TC71 538 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 HMGB4Q8WW32 186 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 ANP32BQ92688 251 aaKnown RBP3.69□□□□□ -1.82
SCFD1-204ENST00000463622 SMARCD1Q96GM5 515 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 TNIP3Q96KP6 325 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 MCEEQ96PE7 176 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 WDR24Q96S15 920 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 PEBP4Q96S96 227 aa3.69□□□□□ -1.82
SCFD1-204ENST00000463622 HERPUD2Q9BSE4 406 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms