RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 ST8SIA4Q92187 359 aa2.16□□□□□ -2.06
NDUFA4-202ENST00000463308 HTRA1Q92743 480 aa2.16□□□□□ -2.06
NDUFA4-202ENST00000463308 SENP5Q96HI0 755 aaPredicted RBP2.16□□□□□ -2.06
NDUFA4-202ENST00000463308 NR1H4Q96RI1 486 aaPredicted RBP2.16□□□□□ -2.06
NDUFA4-202ENST00000463308 SMC6Q96SB8 1091 aa2.16□□□□□ -2.06
NDUFA4-202ENST00000463308 SEMA3CQ99985 751 aa2.16□□□□□ -2.06
NDUFA4-202ENST00000463308 PIGQQ9BRB3 760 aa2.16□□□□□ -2.06
NDUFA4-202ENST00000463308 GPATCH1Q9BRR8 931 aaKnown RBP2.16□□□□□ -2.06
NDUFA4-202ENST00000463308 SIX2Q9NPC8 291 aa2.16□□□□□ -2.06
NDUFA4-202ENST00000463308 PLCXD1Q9NUJ7 323 aa2.16□□□□□ -2.06
NDUFA4-202ENST00000463308 RRN3Q9NYV6 651 aa2.16□□□□□ -2.06
NDUFA4-202ENST00000463308 PTTG2Q9NZH5 202 aa2.16□□□□□ -2.06
NDUFA4-202ENST00000463308 ABI3Q9P2A4 366 aa2.16□□□□□ -2.06
NDUFA4-202ENST00000463308 COPG2Q9UBF2 871 aa2.16□□□□□ -2.06
NDUFA4-202ENST00000463308 GJD2Q9UKL4 321 aa2.16□□□□□ -2.06
NDUFA4-202ENST00000463308 MKLN1Q9UL63 735 aa2.16□□□□□ -2.06
NDUFA4-202ENST00000463308 CSAG2Q9Y5P2 127 aa2.16□□□□□ -2.06
NDUFA4-202ENST00000463308 IGHV4-4A0A075B6R2 117 aa2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 CCDC196A0A1B0GTZ2 297 aa2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 KANSL1LA0AUZ9 987 aa2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 EIF4E1BA6NMX2 242 aaKnown RBP2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 MAGEB17A8MXT2 336 aa2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 PLOD2O00469 737 aa2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 SYNCRIPO60506 623 aaKnown RBP2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 JRKO75564 520 aa2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 CSPG5O95196 566 aa2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 UBL4AP11441 157 aa2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 PPM1FP49593 454 aaPredicted RBP2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 CTSCP53634 463 aa2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 RPS18P62269 152 aaKnown RBP2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 LRMPQ12912 555 aa2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 FRG1Q14331 258 aaKnown RBP2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 TEAD2Q15562 447 aa2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 NSUN5P2Q63ZY6 315 aa2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 Q75L30 129 aa2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 ZNF354CQ86Y25 554 aa2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 LMNTD2Q8IXW0 634 aa2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 HM13Q8TCT9 377 aa2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 PAIP1Q9H074 479 aaKnown RBP2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 KAT14Q9H8E8 782 aa2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 PANK3Q9H999 370 aa2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 PRR34Q9NV39 138 aa2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 PRO0461Q9UI25 63 aa2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 ARHGEF40Q8TER5 1519 aa2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 FLT1P17948 1338 aa2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 KDM3AQ9Y4C1 1321 aa2.15□□□□□ -2.07
NDUFA4-202ENST00000463308 IGKV6D-21A0A0A0MT36 114 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 A0A1W2PRG0 241 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 RRN3P2A6NIE6 340 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 TGFB1I1O43294 461 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 SRSF10O75494 262 aaKnown RBP2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 NXPH2O95156 264 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 BMP10O95393 424 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 LIPFP07098 398 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 EPHA2P29317 976 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 EPHA8P29322 1005 aaPredicted RBP2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 ICAM3P32942 547 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 WNT5AP41221 380 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 MAPK9P45984 424 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 HARS2P49590 506 aaKnown RBP2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 CD81P60033 236 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 ZBED6P86452 979 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 TMEM115Q12893 351 aaPredicted RBP2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 HNRNPDQ14103 355 aaKnown RBP2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 ZRSR2Q15696 482 aaKnown RBP2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 SDCCAG8Q86SQ7 713 aaPredicted RBP2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 PM20D2Q8IYS1 436 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 CPXCR1Q8N123 301 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 CNTROBQ8N137 903 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 SLC39A11Q8N1S5 342 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 RASGEF1CQ8N431 466 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 C1orf52Q8N6N3 182 aaKnown RBP2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 TMEM178AQ8NBL3 297 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 OR1J2Q8NGS2 313 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 MMABQ96EY8 250 aaPredicted RBP2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 SLX1AQ9BQ83 275 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 CHST11Q9NPF2 352 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 FLRT3Q9NZU0 649 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 DNAJB4Q9UDY4 337 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 LIMA1Q9UHB6 759 aaKnown RBP2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 RARRES3Q9UL19 164 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 MAU2Q9Y6X3 613 aa2.14□□□□□ -2.07
NDUFA4-202ENST00000463308 IGLV3-10A0A075B6K4 115 aa2.13□□□□□ -2.07
NDUFA4-202ENST00000463308 ATP2A1O14983 1001 aa2.13□□□□□ -2.07
NDUFA4-202ENST00000463308 PAGE4O60829 102 aa2.13□□□□□ -2.07
NDUFA4-202ENST00000463308 ICAM1P05362 532 aa2.13□□□□□ -2.07
NDUFA4-202ENST00000463308 CEBPBP17676 345 aa2.13□□□□□ -2.07
NDUFA4-202ENST00000463308 XBP1P17861 261 aa2.13□□□□□ -2.07
NDUFA4-202ENST00000463308 CDC25CP30307 473 aa2.13□□□□□ -2.07
NDUFA4-202ENST00000463308 KRT9P35527 623 aa2.13□□□□□ -2.07
NDUFA4-202ENST00000463308 PRCPP42785 496 aa2.13□□□□□ -2.07
NDUFA4-202ENST00000463308 F2RL1P55085 397 aa2.13□□□□□ -2.07
NDUFA4-202ENST00000463308 HUNKP57058 714 aa2.13□□□□□ -2.07
NDUFA4-202ENST00000463308 SNX16P57768 344 aa2.13□□□□□ -2.07
NDUFA4-202ENST00000463308 DHX8Q14562 1220 aaKnown RBP2.13□□□□□ -2.07
NDUFA4-202ENST00000463308 CCNG2Q16589 344 aa2.13□□□□□ -2.07
NDUFA4-202ENST00000463308 PNLIPRP3Q17RR3 467 aa2.13□□□□□ -2.07
NDUFA4-202ENST00000463308 FASTKD1Q53R41 847 aaKnown RBP2.13□□□□□ -2.07
NDUFA4-202ENST00000463308 C2CD6Q53TS8 623 aa2.13□□□□□ -2.07
NDUFA4-202ENST00000463308 ZNF805Q5CZA5 627 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms