RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 TGIF1Q15583 401 aa17.66■□□□□ 0.42
LINC00960-201ENST00000463183 CLPPQ16740 277 aaPredicted RBP17.66■□□□□ 0.42
LINC00960-201ENST00000463183 ARHGAP40Q5TG30 622 aa17.66■□□□□ 0.42
LINC00960-201ENST00000463183 TAS2R42Q7RTR8 314 aa17.66■□□□□ 0.42
LINC00960-201ENST00000463183 AVL9Q8NBF6 648 aa17.66■□□□□ 0.42
LINC00960-201ENST00000463183 TRIM58Q8NG06 486 aa17.66■□□□□ 0.42
LINC00960-201ENST00000463183 JPH3Q8WXH2 748 aaPredicted RBP17.66■□□□□ 0.42
LINC00960-201ENST00000463183 TMEM159Q96B96 161 aa17.66■□□□□ 0.42
LINC00960-201ENST00000463183 FRMD8P1Q9BZ68 369 aaPredicted RBP17.66■□□□□ 0.42
LINC00960-201ENST00000463183 ARNT2Q9HBZ2 717 aa17.66■□□□□ 0.42
LINC00960-201ENST00000463183 RAB6BQ9NRW1 208 aa17.66■□□□□ 0.42
LINC00960-201ENST00000463183 CFAP20Q9Y6A4 193 aaKnown RBP17.66■□□□□ 0.42
LINC00960-201ENST00000463183 BPTFQ12830 3046 aa17.66■□□□□ 0.42
LINC00960-201ENST00000463183 LOC400499M0QZD8 3231 aa17.65■□□□□ 0.42
LINC00960-201ENST00000463183 EFCAB7A8K855 629 aa17.65■□□□□ 0.42
LINC00960-201ENST00000463183 HGSO14964 777 aaPredicted RBP17.65■□□□□ 0.42
LINC00960-201ENST00000463183 RALBP11234 206 aa17.65■□□□□ 0.42
LINC00960-201ENST00000463183 XRCC1P18887 633 aaPredicted RBP17.65■□□□□ 0.42
LINC00960-201ENST00000463183 CDKN1CP49918 316 aaPredicted RBP17.65■□□□□ 0.42
LINC00960-201ENST00000463183 TERF1P54274 439 aa17.65■□□□□ 0.42
LINC00960-201ENST00000463183 CLN3Q13286 438 aa17.65■□□□□ 0.42
LINC00960-201ENST00000463183 TMEM164Q5U3C3 297 aa17.65■□□□□ 0.42
LINC00960-201ENST00000463183 TMEM26Q6ZUK4 368 aa17.65■□□□□ 0.42
LINC00960-201ENST00000463183 GSTA5Q7RTV2 222 aa17.65■□□□□ 0.42
LINC00960-201ENST00000463183 SNX20Q7Z614 316 aa17.65■□□□□ 0.42
LINC00960-201ENST00000463183 ZFAND4Q86XD8 727 aa17.65■□□□□ 0.42
LINC00960-201ENST00000463183 GLIS1Q8NBF1 620 aa17.65■□□□□ 0.42
LINC00960-201ENST00000463183 AGBL5Q8NDL9 886 aa17.65■□□□□ 0.42
LINC00960-201ENST00000463183 ART4Q93070 314 aa17.65■□□□□ 0.42
LINC00960-201ENST00000463183 PMEPA1Q969W9 287 aa17.65■□□□□ 0.42
LINC00960-201ENST00000463183 ULK4Q96C45 1275 aa17.65■□□□□ 0.42
LINC00960-201ENST00000463183 RTP4Q96DX8 246 aa17.65■□□□□ 0.42
LINC00960-201ENST00000463183 COPS8Q99627 209 aa17.65■□□□□ 0.42
LINC00960-201ENST00000463183 DPYSL5Q9BPU6 564 aa17.65■□□□□ 0.42
LINC00960-201ENST00000463183 IMP3Q9NV31 184 aaKnown RBP17.65■□□□□ 0.42
LINC00960-201ENST00000463183 OCIAD1Q9NX40 245 aa17.65■□□□□ 0.42
LINC00960-201ENST00000463183 PCDHGA7Q9Y5G6 932 aa17.65■□□□□ 0.42
LINC00960-201ENST00000463183 C9orf172C9J069 976 aa17.64■□□□□ 0.41
LINC00960-201ENST00000463183 UBXN7O94888 489 aa17.64■□□□□ 0.41
LINC00960-201ENST00000463183 GAS8O95995 478 aa17.64■□□□□ 0.41
LINC00960-201ENST00000463183 POLBP06746 335 aa17.64■□□□□ 0.41
LINC00960-201ENST00000463183 FGF3P11487 239 aaPredicted RBP17.64■□□□□ 0.41
LINC00960-201ENST00000463183 GRIA1P42261 906 aa17.64■□□□□ 0.41
LINC00960-201ENST00000463183 EPHA4P54764 986 aa17.64■□□□□ 0.41
LINC00960-201ENST00000463183 GFERP55789 205 aa17.64■□□□□ 0.41
LINC00960-201ENST00000463183 TMPRSS3P57727 454 aa17.64■□□□□ 0.41
LINC00960-201ENST00000463183 TRA2AQ13595 282 aaKnown RBP eCLIP17.64■□□□□ 0.41
LINC00960-201ENST00000463183 GPR18Q14330 331 aa17.64■□□□□ 0.41
LINC00960-201ENST00000463183 ABRAXAS1Q6UWZ7 409 aa17.64■□□□□ 0.41
LINC00960-201ENST00000463183 ZNF662Q6ZS27 426 aa17.64■□□□□ 0.41
LINC00960-201ENST00000463183 LINC00523Q86TU6 105 aa17.64■□□□□ 0.41
LINC00960-201ENST00000463183 KLHDC8BQ8IXV7 354 aa17.64■□□□□ 0.41
LINC00960-201ENST00000463183 NXPE1Q8N323 547 aa17.64■□□□□ 0.41
LINC00960-201ENST00000463183 TGM7Q96PF1 710 aa17.64■□□□□ 0.41
LINC00960-201ENST00000463183 TLR10Q9BXR5 811 aa17.64■□□□□ 0.41
LINC00960-201ENST00000463183 DPH1Q9BZG8 443 aa17.64■□□□□ 0.41
LINC00960-201ENST00000463183 PRORYQ9H606 182 aa17.64■□□□□ 0.41
LINC00960-201ENST00000463183 POT1Q9NUX5 634 aa17.64■□□□□ 0.41
LINC00960-201ENST00000463183 IGSF10Q6WRI0 2623 aa17.63■□□□□ 0.41
LINC00960-201ENST00000463183 LILRA5A6NI73 299 aa17.63■□□□□ 0.41
LINC00960-201ENST00000463183 PRR19A6NJB7 356 aa17.63■□□□□ 0.41
LINC00960-201ENST00000463183 CFAP99D6REC4 459 aa17.63■□□□□ 0.41
LINC00960-201ENST00000463183 APRTP07741 180 aa17.63■□□□□ 0.41
LINC00960-201ENST00000463183 FDFT1P37268 417 aa17.63■□□□□ 0.41
LINC00960-201ENST00000463183 CDH17Q12864 832 aa17.63■□□□□ 0.41
LINC00960-201ENST00000463183 PLCL1Q15111 1095 aa17.63■□□□□ 0.41
LINC00960-201ENST00000463183 SIX1Q15475 284 aaPredicted RBP17.63■□□□□ 0.41
LINC00960-201ENST00000463183 AGAP9Q5VTM2 703 aa17.63■□□□□ 0.41
LINC00960-201ENST00000463183 DUS1LQ6P1R4 473 aaKnown RBP17.63■□□□□ 0.41
LINC00960-201ENST00000463183 GPR155Q7Z3F1 870 aa17.63■□□□□ 0.41
LINC00960-201ENST00000463183 SERPINA9Q86WD7 417 aa17.63■□□□□ 0.41
LINC00960-201ENST00000463183 GPR150Q8NGU9 434 aa17.63■□□□□ 0.41
LINC00960-201ENST00000463183 RNF31Q96EP0 1072 aa17.63■□□□□ 0.41
LINC00960-201ENST00000463183 ZNF514Q96K75 400 aaPredicted RBP17.63■□□□□ 0.41
LINC00960-201ENST00000463183 CTRCQ99895 268 aa17.63■□□□□ 0.41
LINC00960-201ENST00000463183 WWP1Q9H0M0 922 aa17.63■□□□□ 0.41
LINC00960-201ENST00000463183 NLE1Q9NVX2 485 aaPredicted RBP17.63■□□□□ 0.41
LINC00960-201ENST00000463183 SLC39A1Q9NY26 324 aa17.63■□□□□ 0.41
LINC00960-201ENST00000463183 MGAT4DA6NG13 374 aa17.62■□□□□ 0.41
LINC00960-201ENST00000463183 OR51F1A6NGY5 319 aa17.62■□□□□ 0.41
LINC00960-201ENST00000463183 NVLO15381 856 aaKnown RBP17.62■□□□□ 0.41
LINC00960-201ENST00000463183 KCNJ13O60928 360 aa17.62■□□□□ 0.41
LINC00960-201ENST00000463183 RASSF9O75901 435 aa17.62■□□□□ 0.41
LINC00960-201ENST00000463183 KCNJ1P48048 391 aa17.62■□□□□ 0.41
LINC00960-201ENST00000463183 SEPHS1P49903 392 aa17.62■□□□□ 0.41
LINC00960-201ENST00000463183 BASP1P80723 227 aaKnown RBP17.62■□□□□ 0.41
LINC00960-201ENST00000463183 SRSF6Q13247 344 aaKnown RBP17.62■□□□□ 0.41
LINC00960-201ENST00000463183 SQSTM1Q13501 440 aa17.62■□□□□ 0.41
LINC00960-201ENST00000463183 RPE65Q16518 533 aa17.62■□□□□ 0.41
LINC00960-201ENST00000463183 WDR74Q6RFH5 385 aaPredicted RBP17.62■□□□□ 0.41
LINC00960-201ENST00000463183 WASH2PQ6VEQ5 465 aa17.62■□□□□ 0.41
LINC00960-201ENST00000463183 CFAP206Q8IYR0 622 aa17.62■□□□□ 0.41
LINC00960-201ENST00000463183 LILRA3Q8N6C8 439 aaPredicted RBP17.62■□□□□ 0.41
LINC00960-201ENST00000463183 STYXQ8WUJ0 223 aa17.62■□□□□ 0.41
LINC00960-201ENST00000463183 UBE2Q2Q8WVN8 375 aa17.62■□□□□ 0.41
LINC00960-201ENST00000463183 RSC1A1Q92681 617 aa17.62■□□□□ 0.41
LINC00960-201ENST00000463183 CDKN2AIPNLQ96HQ2 116 aa17.62■□□□□ 0.41
LINC00960-201ENST00000463183 C12orf66Q96MD2 445 aa17.62■□□□□ 0.41
LINC00960-201ENST00000463183 WASH6PQ9NQA3 447 aa17.62■□□□□ 0.41
LINC00960-201ENST00000463183 OGFRQ9NZT2 677 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms