RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	MRPS25	P82663	173 aa	Known RBP	9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	CYP4F3	Q08477	520 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	C2orf54	Q08AI8	447 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	PTK6	Q13882	451 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	KRT33B	Q14525	404 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	KIR2DS5	Q14953	304 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	BRD3	Q15059	726 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	ISX	Q2M1V0	245 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	C3orf38	Q5JPI3	329 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	CDCP2	Q5VXM1	449 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	ZNF449	Q6P9G9	518 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	ZNF534	Q76KX8	674 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	C11orf96	Q7Z7L8	435 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	LDB1	Q86U70	411 aa	Predicted RBP	9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	JAML	Q86YT9	394 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	CFAP206	Q8IYR0	622 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	SFRP1	Q8N474	314 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	DCBLD1	Q8N8Z6	715 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	OR10G6	Q8NH81	332 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	WDR48	Q8TAF3	677 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	MDM1	Q8TC05	714 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	JPH3	Q8WXH2	748 aa	Predicted RBP	9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	ZCCHC14	Q8WYQ9	949 aa	Known RBP	9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	ZNF669	Q96BR6	464 aa	Predicted RBP	9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	NXPE2	Q96DL1	559 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	RUNDC3B	Q96NL0	473 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	C19orf43	Q9BQ61	176 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	CCM2	Q9BSQ5	444 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	WWP1	Q9H0M0	922 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	VPS37B	Q9H9H4	285 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	RDH14	Q9HBH5	336 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	KCND1	Q9NSA2	647 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	IMP3	Q9NV31	184 aa	Known RBP	9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	SCHIP1	Q9P0W5	487 aa	Predicted RBP	9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	CPNE7	Q9UBL6	633 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	RNF14	Q9UBS8	474 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	CFAP20	Q9Y6A4	193 aa	Known RBP	9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	SPEG	Q15772	3267 aa		9.44	□□□□□ -0.9
PSMD4-208	ENST00000462970	APC2	O95996	2303 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	COL27A1	Q8IZC6	1860 aa	Predicted RBP	9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	TRBV5-4	A0A0C4DH59	114 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	PRAMEF33	A0A0G2JMD5	474 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970		A0A1W2PQM1	296 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970		A6NCN8	305 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	SDR42E2	A6NKP2	422 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	OR5K4	A6NMS3	321 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	GOLGA8K	D6RF30	607 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	GOLGA8T	H3BQL2	631 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	CCDC188	H7C350	402 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	DNALI1	O14645	258 aa	Predicted RBP	9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	CD3EAP	O15446	510 aa	Known RBP	9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	B4GAT1	O43505	415 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	OR1I1	O60431	355 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	NDUFS3	O75489	264 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	URI1	O94763	535 aa	Predicted RBP	9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	MPO	P05164	745 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	MPST	P25325	297 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	PPARG	P37231	505 aa	Predicted RBP	9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	MAGEA6	P43360	314 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	PRLHR	P49683	370 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	INHBC	P55103	352 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	BCL7A	Q4VC05	210 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	SYTL3	Q4VX76	610 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	AARS2	Q5JTZ9	985 aa	Known RBP	9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	SNAP47	Q5SQN1	464 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	RNASEH2B	Q5TBB1	312 aa	Known RBP	9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	LYPLAL1	Q5VWZ2	237 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	DUS1L	Q6P1R4	473 aa	Known RBP	9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	SYDE1	Q6ZW31	735 aa	Predicted RBP	9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	B3GNT8	Q7Z7M8	397 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	PIM3	Q86V86	326 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	CAND1	Q86VP6	1230 aa	Known RBP	9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	C17orf82	Q86X59	251 aa	Predicted RBP	9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	AVL9	Q8NBF6	648 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	MCU	Q8NE86	351 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	NCSTN	Q92542	709 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	ELMO1	Q92556	727 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	GATA6	Q92908	595 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	SH3KBP1	Q96B97	665 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	MFSD3	Q96ES6	412 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	C12orf66	Q96MD2	445 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	SERPINB12	Q96P63	405 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	NUDT22	Q9BRQ3	303 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	TRIM56	Q9BRZ2	755 aa	Known RBP	9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	TBC1D10A	Q9BXI6	508 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	STRADB	Q9C0K7	418 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	CCDC86	Q9H6F5	360 aa	Known RBP	9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	WDR70	Q9NW82	654 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	MARCH4	Q9P2E8	410 aa	Predicted RBP	9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	KLHL3	Q9UH77	587 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	PCYOX1	Q9UHG3	505 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	SOX13	Q9UN79	622 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	WDR37	Q9Y2I8	494 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	NEU2	Q9Y3R4	380 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	PRSS21	Q9Y6M0	314 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	EPG5	Q9HCE0	2579 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	ZFHX4	Q86UP3	3567 aa		9.43	□□□□□ -0.9
PSMD4-208	ENST00000462970	IGHV1OR21-1	A0A087WYE8	117 aa		9.42	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms