RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 PLTPP55058 493 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 CXADRP78310 365 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 MTA1Q13330 715 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 XRCC4Q13426 336 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 HABP2Q14520 560 aaPredicted RBP7.43□□□□□ -1.22
UBE4B-204ENST00000462658 RAB30Q15771 203 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 MS4A13Q5J8X5 152 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 MANEALQ5VSG8 457 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 NUGGCQ68CJ6 796 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 RWDD4Q6NW29 188 aaKnown RBP7.43□□□□□ -1.22
UBE4B-204ENST00000462658 LRRC31Q6UY01 552 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 B4GALNT4Q76KP1 1039 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 CHST15Q7LFX5 561 aaPredicted RBP7.43□□□□□ -1.22
UBE4B-204ENST00000462658 MRGPREQ86SM8 312 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 PRUNE1Q86TP1 453 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 TMC8Q8IU68 726 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 CDKL3Q8IVW4 592 aaPredicted RBP7.43□□□□□ -1.22
UBE4B-204ENST00000462658 Q8N1X5 172 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 FAM71DQ8N9W8 422 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 Q8NA96 180 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 GLIS1Q8NBF1 620 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 AENQ8WTP8 325 aaKnown RBP7.43□□□□□ -1.22
UBE4B-204ENST00000462658 SLC22A17Q8WUG5 538 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.43□□□□□ -1.22
UBE4B-204ENST00000462658 MRPS31Q92665 395 aaKnown RBP7.43□□□□□ -1.22
UBE4B-204ENST00000462658 MYEOVQ96EZ4 313 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 ALOXE3Q9BYJ1 711 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 KRTAP9-3Q9BYQ3 159 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 TINAGL1Q9GZM7 467 aaPredicted RBP7.43□□□□□ -1.22
UBE4B-204ENST00000462658 NEUROG2Q9H2A3 272 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 CATSPERBQ9H7T0 1116 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 PCDH9Q9HC56 1237 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 TRPC7Q9HCX4 862 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 GRHL1Q9NZI5 618 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 RAD54BQ9Y620 910 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 PLXNA4Q9HCM2 1894 aa7.43□□□□□ -1.22
UBE4B-204ENST00000462658 GOLGA6L7A0A1B0GV03 622 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 NCAM2O15394 837 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 KCNN4O15554 427 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 MFSD11O43934 449 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 ACSL4O60488 711 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 VPS4BO75351 444 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 RFPL2O75678 378 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 MBL2P11226 248 aaPredicted RBP7.42□□□□□ -1.22
UBE4B-204ENST00000462658 MYL4P12829 197 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 C6P13671 934 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 ETS1P14921 441 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 EPCAMP16422 314 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 PTPN2P17706 415 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 IVDP26440 423 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 CDC25CP30307 473 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 HOXC13P31276 330 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 SERPINB6P35237 376 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 TNNT3P45378 269 aaPredicted RBP7.42□□□□□ -1.22
UBE4B-204ENST00000462658 SLC11A2P49281 568 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 HARS2P49590 506 aaKnown RBP7.42□□□□□ -1.22
UBE4B-204ENST00000462658 CAV1Q03135 178 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 ZNF844Q08AG5 666 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 GPS1Q13098 491 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 CALCOCO2Q13137 446 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 TP53BP2Q13625 1128 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 PDK1Q15118 436 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 GEN1Q17RS7 908 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 FAM153CQ494X1 144 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 SLC45A4Q5BKX6 768 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 EMC10Q5UCC4 262 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 RAP1GAP2Q684P5 730 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 TXNDC8Q6A555 127 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 PPP4R4Q6NUP7 873 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 EMBQ6PCB8 327 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 ZDHHC24Q6UX98 284 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 RHOUQ7L0Q8 258 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 RBM23Q86U06 439 aaKnown RBP7.42□□□□□ -1.22
UBE4B-204ENST00000462658 CCDC33Q8N5R6 958 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 DEFB123Q8N688 67 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 ARL14EPQ8N8R7 260 aaPredicted RBP7.42□□□□□ -1.22
UBE4B-204ENST00000462658 BBOF1Q8ND07 529 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 CCNYQ8ND76 341 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 TFB1MQ8WVM0 346 aaKnown RBP7.42□□□□□ -1.22
UBE4B-204ENST00000462658 ARNTL2Q8WYA1 636 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 ART4Q93070 314 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 AZIN2Q96A70 460 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 LRRC45Q96CN5 670 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 SNF8Q96H20 258 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 OLFM3Q96PB7 478 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 QKIQ96PU8 341 aaKnown RBP eCLIP7.42□□□□□ -1.22
UBE4B-204ENST00000462658 GCNAQ96QF7 691 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 CYP2S1Q96SQ9 504 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 CDX2Q99626 313 aaPredicted RBP7.42□□□□□ -1.22
UBE4B-204ENST00000462658 PRMT1Q99873 361 aaKnown RBP7.42□□□□□ -1.22
UBE4B-204ENST00000462658 FAM129AQ9BZQ8 928 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 LMAN2LQ9H0V9 348 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 SLC28A3Q9HAS3 691 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 USP29Q9HBJ7 922 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 ASAH2Q9NR71 780 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 GKN1Q9NS71 199 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 ZDHHC18Q9NUE0 388 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 ZNF446Q9NWS9 450 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 FAM153AQ9UHL3 310 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 KCNE5Q9UJ90 142 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms