RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 PSMB4P28070 264 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 ADRA1AP35348 466 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 STAT5AP42229 794 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 SPINT3P49223 89 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 GDF10P55107 478 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 GFERP55789 205 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 UBE2IP63279 158 aaKnown RBP7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 CDK18Q07002 472 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 ABHD18Q0P651 414 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 NFATC2Q13469 925 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 BIRC2Q13490 618 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 OLIG2Q13516 323 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 PEX6Q13608 980 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 OASLQ15646 514 aaKnown RBP7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 CRTC2Q53ET0 693 aaPredicted RBP7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 ANKRD20A2Q5SQ80 823 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 SNAP47Q5SQN1 464 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 ANKRD20A1Q5TYW2 823 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 ANKRD20A3Q5VUR7 823 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 IYDQ6PHW0 289 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 CEACAM20Q6UY09 585 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 PID1Q7Z2X4 250 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 KDELC2Q7Z4H8 507 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 SLC13A5Q86YT5 568 aaPredicted RBP7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 RAVER1Q8IY67 606 aaKnown RBP7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 NRSN1Q8IZ57 195 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 TTC30BQ8N4P2 665 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 OR10G6Q8NH81 332 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 CCDC110Q8TBZ0 833 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 STARD8Q92502 1023 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 MIB2Q96AX9 1013 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 ABHD17AQ96GS6 310 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 VAT1Q99536 393 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 SLC38A3Q99624 504 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 RIOK2Q9BVS4 552 aaKnown RBP7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 TBC1D10AQ9BXI6 508 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 TLR10Q9BXR5 811 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 ZMYND15Q9H091 742 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 LZTFL1Q9NQ48 299 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 FBXO8Q9NRD0 319 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 OGFRQ9NZT2 677 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 VPS18Q9P253 973 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 NFKBIL1Q9UBC1 381 aaPredicted RBP7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 FAM153AQ9UHL3 310 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 RSPH14Q9UHP6 348 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 TRHDEQ9UKU6 1024 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 KCNK6Q9Y257 313 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 PLAAQ9Y263 795 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 MAN2B2Q9Y2E5 1009 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 ZNF711Q9Y462 761 aa7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 SNRNP200O75643 2136 aaKnown RBP7.81□□□□□ -1.16
CDC42BPA-210ENST00000462553 C5orf60A6NFR6 353 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 LILRA5A6NI73 299 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 PRR19A6NJB7 356 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 K7EM74 188 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 FURINP09958 794 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 ANKRD34CP0C6C1 535 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 GP1BBP13224 206 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 ACP5P13686 325 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 F3P13726 295 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 MAP4P27816 1152 aaKnown RBP7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 CETN2P41208 172 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 CD97P48960 835 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 EPHA4P54764 986 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 DCDC1P59894 354 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 MPP3Q13368 585 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 MSLNQ13421 630 aaPredicted RBP7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 MAP7Q14244 749 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 DEFB109BQ30KR1 87 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 LACTB2Q53H82 288 aaPredicted RBP7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 SIRPB2Q5JXA9 342 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 SEL1L2Q5TEA6 688 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 CCDC181Q5TID7 509 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 DARS2Q6PI48 645 aaKnown RBP7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 CHST15Q7LFX5 561 aaPredicted RBP7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 TMC3Q7Z5M5 1100 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 REXO1L1PQ8IX06 675 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 NDUFAF2Q8N183 169 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 IPMKQ8NFU5 416 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 ATG4AQ8WYN0 398 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 NCSTNQ92542 709 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 KIAA1143Q96AT1 154 aaPredicted RBP7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 RNF31Q96EP0 1072 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 AHCYL2Q96HN2 611 aaKnown RBP7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 SPATA13Q96N96 652 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 ZPBPQ9BS86 351 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 ADGRE3Q9BY15 652 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 CARD9Q9H257 536 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 MAGEE1Q9HCI5 957 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 KLHL3Q9UH77 587 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 SHOC2Q9UQ13 582 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 TP53TG5Q9Y2B4 290 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 PCSK5Q92824 1860 aa7.8□□□□□ -1.16
CDC42BPA-210ENST00000462553 PCM1Q15154 2024 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 ANKRD12Q6UB98 2062 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 RGSL1A5PLK6 1076 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 GAPDHSO14556 408 aaPredicted RBP7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 LIASO43766 372 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 AGTP01019 485 aa7.79□□□□□ -1.16
CDC42BPA-210ENST00000462553 EPOP01588 193 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms