RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 RSPH9Q9H1X1 276 aaPredicted RBP5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 GOLPH3Q9H4A6 298 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 CATSPERBQ9H7T0 1116 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 ABCB8Q9NUT2 735 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 KLHL11Q9NVR0 708 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 NLGN3Q9NZ94 848 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 C6orf203Q9P0P8 240 aaPredicted RBP5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 PPARGC1AQ9UBK2 798 aaKnown RBP5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 GUCA1BQ9UMX6 200 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 CARD8Q9Y2G2 431 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 SH3GLB1Q9Y371 365 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 ALG6Q9Y672 507 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 IKBKGQ9Y6K9 419 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 ABCA2Q9BZC7 2435 aa5.98□□□□□ -1.45
SMARCC1-204ENST00000462198 IGLV3-10A0A075B6K4 115 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 GRID2IPA4D2P6 1211 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 SLC22A31A6NKX4 558 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 LATO43561 262 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 PSTPIP1O43586 416 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 DNAJA2O60884 412 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 PALMO75781 387 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 PIAS2O75928 621 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 GHRHP01286 108 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 KRT1P04264 644 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 EIF2S1P05198 315 aaKnown RBP5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 GSTP1P09211 210 aaKnown RBP5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 HGFP14210 728 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 GOT1P17174 413 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 POLR2EP19388 210 aaKnown RBP5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 S100A1P23297 94 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 HLA-FP30511 346 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 MAT2AP31153 395 aaKnown RBP5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 CD70P32970 193 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 HTR7P34969 479 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 GNALP38405 381 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 MDH1P40925 334 aaKnown RBP5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 CSKP41240 450 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 HCAR3P49019 387 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 MAPKAPK2P49137 400 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 CDH6P55285 790 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 MXRA7P84157 204 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 NSUN2Q08J23 767 aaKnown RBP eCLIP5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 KLRB1Q12918 225 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 PDK2Q15119 407 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 CST6Q15828 149 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 PCSK7Q16549 785 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 DPYSL2Q16555 572 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 POM121L1PQ3SYA9 428 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 CCDC153Q494R4 210 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 ATP13A4Q4VNC1 1196 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 FSCBQ5H9T9 825 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 CFAP157Q5JU67 520 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 MANEALQ5VSG8 457 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 LRRC38Q5VT99 294 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 RNF219Q5W0B1 726 aaPredicted RBP5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 GUSBP11Q6P575 273 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 LRIG3Q6UXM1 1119 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 PACS1Q6VY07 963 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 RFX8Q6ZV50 586 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 CYP4V2Q6ZWL3 525 aaPredicted RBP5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 PEX26Q7Z412 305 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 POLNQ7Z5Q5 900 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 DSG4Q86SJ6 1040 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 SETD3Q86TU7 594 aaPredicted RBP5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 ZNF354CQ86Y25 554 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 MMAAQ8IVH4 418 aaKnown RBP5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 MAP7D3Q8IWC1 876 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 ZNF683Q8IZ20 524 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 RTL3Q8N8U3 475 aaKnown RBP5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 TEX19Q8NA77 164 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 GALNT11Q8NCW6 608 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 WFDC5Q8TCV5 224 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 WFIKKN2Q8TEU8 576 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 ZNF473Q8WTR7 871 aaKnown RBP5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 IFT81Q8WYA0 676 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 ABHD17AQ96GS6 310 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 DUSP23Q9BVJ7 150 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 MRPL46Q9H2W6 279 aaKnown RBP5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 CENPHQ9H3R5 247 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 EPB41L5Q9HCM4 733 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 CASS4Q9NQ75 786 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 TBCCD1Q9NVR7 557 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 TMEM248Q9NWD8 314 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 GALNT8Q9NY28 637 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 RABL2AQ9UBK7 228 aaPredicted RBP5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 REV1Q9UBZ9 1251 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 VPS28Q9UK41 221 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 AMFRQ9UKV5 643 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 FZD4Q9ULV1 537 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 CA5BQ9Y2D0 317 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 TBC1D30Q9Y2I9 924 aa5.97□□□□□ -1.45
SMARCC1-204ENST00000462198 ANKHD1Q8IWZ3 2542 aaKnown RBP5.96□□□□□ -1.45
SMARCC1-204ENST00000462198 CCDC168Q8NDH2 2452 aa5.96□□□□□ -1.46
SMARCC1-204ENST00000462198 ILVBLA1L0T0 632 aa5.96□□□□□ -1.46
SMARCC1-204ENST00000462198 PRR19A6NJB7 356 aa5.96□□□□□ -1.46
SMARCC1-204ENST00000462198 PRAMEF26H0Y7S4 382 aa5.96□□□□□ -1.46
SMARCC1-204ENST00000462198 TMX2-CTNND1H3BSU7 103 aa5.96□□□□□ -1.46
SMARCC1-204ENST00000462198 LSM1O15116 133 aaKnown RBP5.96□□□□□ -1.46
SMARCC1-204ENST00000462198 DIAPH2O60879 1101 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms