RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 GLT6D1Q7Z4J2 308 aa17.52■□□□□ 0.4
SSB-206ENST00000461708 BPHLQ86WA6 291 aaPredicted RBP17.52■□□□□ 0.4
SSB-206ENST00000461708 ZNF567Q8N184 647 aa17.52■□□□□ 0.4
SSB-206ENST00000461708 RASGEF1AQ8N9B8 481 aa17.52■□□□□ 0.4
SSB-206ENST00000461708 C9orf43Q8TAL5 461 aaPredicted RBP17.52■□□□□ 0.4
SSB-206ENST00000461708 ZFPM2Q8WW38 1151 aa17.52■□□□□ 0.4
SSB-206ENST00000461708 UBXN4Q92575 508 aa17.52■□□□□ 0.4
SSB-206ENST00000461708 RSC1A1Q92681 617 aa17.52■□□□□ 0.4
SSB-206ENST00000461708 WDR37Q9Y2I8 494 aa17.52■□□□□ 0.4
SSB-206ENST00000461708 PKP3Q9Y446 797 aa17.52■□□□□ 0.4
SSB-206ENST00000461708 GAPDHSO14556 408 aaPredicted RBP17.51■□□□□ 0.39
SSB-206ENST00000461708 KIF1CO43896 1103 aaKnown RBP17.51■□□□□ 0.39
SSB-206ENST00000461708 POP7O75817 140 aaKnown RBP17.51■□□□□ 0.39
SSB-206ENST00000461708 NDUFA10O95299 355 aa17.51■□□□□ 0.39
SSB-206ENST00000461708 MT-ND3P03897 115 aa17.51■□□□□ 0.39
SSB-206ENST00000461708 ZNF28P17035 718 aa17.51■□□□□ 0.39
SSB-206ENST00000461708 CASRP41180 1078 aa17.51■□□□□ 0.39
SSB-206ENST00000461708 CHRNA4P43681 627 aa17.51■□□□□ 0.39
SSB-206ENST00000461708 SEPHS1P49903 392 aa17.51■□□□□ 0.39
SSB-206ENST00000461708 SH3BP2P78314 561 aa17.51■□□□□ 0.39
SSB-206ENST00000461708 ADCY2Q08462 1091 aa17.51■□□□□ 0.39
SSB-206ENST00000461708 CHRNA6Q15825 494 aa17.51■□□□□ 0.39
SSB-206ENST00000461708 PPP2R5EQ16537 467 aa17.51■□□□□ 0.39
SSB-206ENST00000461708 GPRC6AQ5T6X5 926 aa17.51■□□□□ 0.39
SSB-206ENST00000461708 METRNLQ641Q3 311 aa17.51■□□□□ 0.39
SSB-206ENST00000461708 KAZNQ674X7 775 aa17.51■□□□□ 0.39
SSB-206ENST00000461708 BBS12Q6ZW61 710 aa17.51■□□□□ 0.39
SSB-206ENST00000461708 ZC3H18Q86VM9 953 aaKnown RBP17.51■□□□□ 0.39
SSB-206ENST00000461708 KMT5CQ86Y97 462 aa17.51■□□□□ 0.39
SSB-206ENST00000461708 RBM41Q96IZ5 413 aaKnown RBP17.51■□□□□ 0.39
SSB-206ENST00000461708 SLC41A2Q96JW4 573 aa17.51■□□□□ 0.39
SSB-206ENST00000461708 KCND3Q9UK17 655 aa17.51■□□□□ 0.39
SSB-206ENST00000461708 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.51■□□□□ 0.39
SSB-206ENST00000461708 PCDHB3Q9Y5E6 796 aa17.51■□□□□ 0.39
SSB-206ENST00000461708 PCDHGA6Q9Y5G7 932 aa17.51■□□□□ 0.39
SSB-206ENST00000461708 DOPEY2Q9Y3R5 2298 aa17.51■□□□□ 0.39
SSB-206ENST00000461708 PRRC2CQ9Y520 2896 aaKnown RBP17.5■□□□□ 0.39
SSB-206ENST00000461708 UGT1A9O60656 530 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 UGT1A6P19224 532 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 UGT1A1P22309 533 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 UGT1A4P22310 534 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 DLSTP36957 453 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 MAGEA1P43355 309 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 SEPT6Q14141 434 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 NOMO1Q15155 1222 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 RPE65Q16518 533 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 LONRF2Q1L5Z9 754 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 DEFB109BQ30KR1 87 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 C11orf63Q6NUN7 778 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 IRGCQ6NXR0 463 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 FAM151BQ6UXP7 276 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 PPP1R3BQ86XI6 285 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 RASGRP3Q8IV61 690 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 SLC25A41Q8N5S1 370 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 BEND7Q8N7W2 519 aaPredicted RBP17.5■□□□□ 0.39
SSB-206ENST00000461708 GALNT6Q8NCL4 622 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 IPMKQ8NFU5 416 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 BLOC1S5Q8TDH9 187 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 STAMBPL1Q96FJ0 436 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 CD180Q99467 661 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 C19orf43Q9BQ61 176 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 TSPY26PQ9H489 355 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 UGT1A7Q9HAW7 530 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 UGT1A10Q9HAW8 530 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 UGT1A8Q9HAW9 530 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 CROTQ9UKG9 612 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 EFR3BQ9Y2G0 817 aa17.5■□□□□ 0.39
SSB-206ENST00000461708 APOC4-APOC2K7ER74 178 aa17.49■□□□□ 0.39
SSB-206ENST00000461708 SPAG6O75602 509 aa17.49■□□□□ 0.39
SSB-206ENST00000461708 ANXA9O76027 345 aa17.49■□□□□ 0.39
SSB-206ENST00000461708 KIAA0754O94854 1291 aa17.49■□□□□ 0.39
SSB-206ENST00000461708 APOC2P02655 101 aa17.49■□□□□ 0.39
SSB-206ENST00000461708 CCNYL3P0C7X3 344 aa17.49■□□□□ 0.39
SSB-206ENST00000461708 PYGMP11217 842 aa17.49■□□□□ 0.39
SSB-206ENST00000461708 F8A1P23610 371 aa17.49■□□□□ 0.39
SSB-206ENST00000461708 CTSCP53634 463 aa17.49■□□□□ 0.39
SSB-206ENST00000461708 COPS2P61201 443 aa17.49■□□□□ 0.39
SSB-206ENST00000461708 FAM92BQ6ZTR7 304 aa17.49■□□□□ 0.39
SSB-206ENST00000461708 PTRH1Q86Y79 214 aaKnown RBP17.49■□□□□ 0.39
SSB-206ENST00000461708 CARFQ8N187 725 aa17.49■□□□□ 0.39
SSB-206ENST00000461708 CALR3Q96L12 384 aaKnown RBP17.49■□□□□ 0.39
SSB-206ENST00000461708 FERMT1Q9BQL6 677 aa17.49■□□□□ 0.39
SSB-206ENST00000461708 FSD1LQ9BXM9 530 aa17.49■□□□□ 0.39
SSB-206ENST00000461708 PDE7BQ9NP56 450 aa17.49■□□□□ 0.39
SSB-206ENST00000461708 TRIM10Q9UDY6 481 aa17.49■□□□□ 0.39
SSB-206ENST00000461708 RSPH14Q9UHP6 348 aa17.49■□□□□ 0.39
SSB-206ENST00000461708 ACSL5Q9ULC5 683 aa17.49■□□□□ 0.39
SSB-206ENST00000461708 PADI1Q9ULC6 663 aa17.49■□□□□ 0.39
SSB-206ENST00000461708 KCNMB2Q9Y691 235 aa17.49■□□□□ 0.39
SSB-206ENST00000461708 USP9YO00507 2555 aaPredicted RBP17.49■□□□□ 0.39
SSB-206ENST00000461708 USP9XQ93008 2570 aaPredicted RBP17.48■□□□□ 0.39
SSB-206ENST00000461708 C5orf60A6NFR6 353 aa17.48■□□□□ 0.39
SSB-206ENST00000461708 C21orf140B9A014 251 aa17.48■□□□□ 0.39
SSB-206ENST00000461708 STX7O15400 261 aaKnown RBP17.48■□□□□ 0.39
SSB-206ENST00000461708 MTHFD1P11586 935 aaKnown RBP17.48■□□□□ 0.39
SSB-206ENST00000461708 LPOP22079 712 aaPredicted RBP17.48■□□□□ 0.39
SSB-206ENST00000461708 GEMP55040 296 aa17.48■□□□□ 0.39
SSB-206ENST00000461708 ITPRIPL1Q6GPH6 555 aa17.48■□□□□ 0.39
SSB-206ENST00000461708 TMEM220Q6QAJ8 160 aa17.48■□□□□ 0.39
SSB-206ENST00000461708 RANBP10Q6VN20 620 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms