RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 KRT38O76015 456 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 MMP2P08253 660 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 VCLP18206 1134 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 GJC1P36383 396 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 ARCN1P48444 511 aaKnown RBP13.44□□□□□ -0.26
PABPC4-208ENST00000461578 NAA30Q147X3 362 aaPredicted RBP13.44□□□□□ -0.26
PABPC4-208ENST00000461578 IFI16Q16666 785 aaKnown RBP13.44□□□□□ -0.26
PABPC4-208ENST00000461578 CT47A1Q5JQC4 288 aaPredicted RBP13.44□□□□□ -0.26
PABPC4-208ENST00000461578 PLEKHS1Q5SXH7 462 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 NCBP2-AS2Q69YL0 99 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 KLHL35Q6PF15 583 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 WASH2PQ6VEQ5 465 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 ZNF517Q6ZMY9 492 aaPredicted RBP13.44□□□□□ -0.26
PABPC4-208ENST00000461578 MED25Q71SY5 747 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 C11orf96Q7Z7L8 435 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 KMT5CQ86Y97 462 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 DSELQ8IZU8 1212 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 D2HGDHQ8N465 521 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 TMEM102Q8N9M5 508 aaPredicted RBP13.44□□□□□ -0.26
PABPC4-208ENST00000461578 GLIS1Q8NBF1 620 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 ANKRD20A12PQ8NF67 263 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 GDAP1Q8TB36 358 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 ZNF501Q96CX3 271 aaPredicted RBP13.44□□□□□ -0.26
PABPC4-208ENST00000461578 CLIP3Q96DZ5 547 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 MOCOSQ96EN8 888 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 SGSM3Q96HU1 749 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 BTBD6Q96KE9 485 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 PPM1MQ96MI6 270 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 ERGIC2Q96RQ1 377 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 ILKAPQ9H0C8 392 aaPredicted RBP13.44□□□□□ -0.26
PABPC4-208ENST00000461578 HAUS4Q9H6D7 363 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 HAUS2Q9NVX0 235 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 SOHLH2Q9NX45 425 aa13.44□□□□□ -0.26
PABPC4-208ENST00000461578 CFAP20Q9Y6A4 193 aaKnown RBP13.44□□□□□ -0.26
PABPC4-208ENST00000461578 PIKFYVEQ9Y2I7 2098 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 OR5K3A6NET4 321 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 VEGFDO43915 354 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 LCA5LO95447 670 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 RAB40ALP0C0E4 278 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 ATXN8OSP0DMR3 200 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 CCNCP24863 283 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 SSR1P43307 286 aaKnown RBP13.43□□□□□ -0.26
PABPC4-208ENST00000461578 RRADP55042 308 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 GSDMDP57764 484 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 DCDC1P59894 354 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 SLC25A11Q02978 314 aaKnown RBP13.43□□□□□ -0.26
PABPC4-208ENST00000461578 ABRQ12979 859 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 GTF2H3Q13889 308 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 RPE65Q16518 533 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 VWA5B1Q5TIE3 1220 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 HGSNATQ68CP4 663 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 ZNF571Q7Z3V5 609 aaPredicted RBP13.43□□□□□ -0.26
PABPC4-208ENST00000461578 TEKT4Q8WW24 435 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 CPT1BQ92523 772 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 TLR10Q9BXR5 811 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 ADGRE3Q9BY15 652 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 NLNQ9BYT8 704 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 GPR63Q9BZJ6 419 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 UNKQ9C0B0 810 aaKnown RBP13.43□□□□□ -0.26
PABPC4-208ENST00000461578 MRPL47Q9HD33 250 aaKnown RBP13.43□□□□□ -0.26
PABPC4-208ENST00000461578 HRASLS2Q9NWW9 162 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 LIMA1Q9UHB6 759 aaKnown RBP13.43□□□□□ -0.26
PABPC4-208ENST00000461578 AMACRQ9UHK6 382 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 B3GNT3Q9Y2A9 372 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 ZNF711Q9Y462 761 aa13.43□□□□□ -0.26
PABPC4-208ENST00000461578 COPG1Q9Y678 874 aaKnown RBP13.43□□□□□ -0.26
PABPC4-208ENST00000461578 SPTBP11277 2137 aa13.42□□□□□ -0.26
PABPC4-208ENST00000461578 FBN2P35556 2912 aa13.42□□□□□ -0.26
PABPC4-208ENST00000461578 LRRC53A6NM62 1247 aa13.42□□□□□ -0.26
PABPC4-208ENST00000461578 DDX3XO00571 662 aaKnown RBP eCLIP13.42□□□□□ -0.26
PABPC4-208ENST00000461578 HNRNPRO43390 633 aaKnown RBP13.42□□□□□ -0.26
PABPC4-208ENST00000461578 ZBTB11O95625 1053 aaPredicted RBP13.42□□□□□ -0.26
PABPC4-208ENST00000461578 BPIP17213 487 aa13.42□□□□□ -0.26
PABPC4-208ENST00000461578 PBLDP30039 288 aaPredicted RBP13.42□□□□□ -0.26
PABPC4-208ENST00000461578 OTX2P32243 289 aa13.42□□□□□ -0.26
PABPC4-208ENST00000461578 GLRBP48167 497 aa13.42□□□□□ -0.26
PABPC4-208ENST00000461578 TMEM115Q12893 351 aaPredicted RBP13.42□□□□□ -0.26
PABPC4-208ENST00000461578 PAFAH1B3Q15102 231 aaKnown RBP13.42□□□□□ -0.26
PABPC4-208ENST00000461578 ASIC2Q16515 512 aa13.42□□□□□ -0.26
PABPC4-208ENST00000461578 PCSK7Q16549 785 aa13.42□□□□□ -0.26
PABPC4-208ENST00000461578 PTCHD3Q3KNS1 767 aa13.42□□□□□ -0.26
PABPC4-208ENST00000461578 TMTC4Q5T4D3 741 aa13.42□□□□□ -0.26
PABPC4-208ENST00000461578 PDPK2PQ6A1A2 396 aa13.42□□□□□ -0.26
PABPC4-208ENST00000461578 DUS1LQ6P1R4 473 aaKnown RBP13.42□□□□□ -0.26
PABPC4-208ENST00000461578 FAM198BQ6UWH4 519 aa13.42□□□□□ -0.26
PABPC4-208ENST00000461578 TMC3Q7Z5M5 1100 aa13.42□□□□□ -0.26
PABPC4-208ENST00000461578 OOSP2Q86WS3 158 aa13.42□□□□□ -0.26
PABPC4-208ENST00000461578 SYTL1Q8IYJ3 562 aa13.42□□□□□ -0.26
PABPC4-208ENST00000461578 SLC34A3Q8N130 599 aa13.42□□□□□ -0.26
PABPC4-208ENST00000461578 CCNYQ8ND76 341 aa13.42□□□□□ -0.26
PABPC4-208ENST00000461578 CD180Q99467 661 aa13.42□□□□□ -0.26
PABPC4-208ENST00000461578 BPIFA1Q9NP55 256 aa13.42□□□□□ -0.26
PABPC4-208ENST00000461578 RAD18Q9NS91 495 aa13.42□□□□□ -0.26
PABPC4-208ENST00000461578 IMP3Q9NV31 184 aaKnown RBP13.42□□□□□ -0.26
PABPC4-208ENST00000461578 TMPRSS11EQ9UL52 423 aa13.42□□□□□ -0.26
PABPC4-208ENST00000461578 NTNG1Q9Y2I2 539 aa13.42□□□□□ -0.26
PABPC4-208ENST00000461578 C2CD3Q4AC94 2353 aa13.42□□□□□ -0.26
PABPC4-208ENST00000461578 OR6C74A6NCV1 312 aa13.41□□□□□ -0.26
PABPC4-208ENST00000461578 KCNK1O00180 336 aa13.41□□□□□ -0.26
PABPC4-208ENST00000461578 CAPN1P07384 714 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms