RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 CES1P23141 567 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 MIPP30301 263 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 SERPINB6P35237 376 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 RPL26P61254 145 aaKnown RBP16.87■□□□□ 0.29
TOP3A-202ENST00000461127 TUBB4BP68371 445 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 GPS2Q13227 327 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 TUBB2AQ13885 445 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 KYNUQ16719 465 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 PLA2G4EQ3MJ16 856 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 ANKRD20A8PQ5CZ79 823 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 ZNF569Q5MCW4 686 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 ABRAXAS1Q6UWZ7 409 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 ZNF517Q6ZMY9 492 aaPredicted RBP16.87■□□□□ 0.29
TOP3A-202ENST00000461127 IRF2BP2Q7Z5L9 587 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 MCEMP1Q8IX19 187 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 ENDOVQ8N8Q3 282 aaKnown RBP16.87■□□□□ 0.29
TOP3A-202ENST00000461127 ZNF830Q96NB3 372 aaPredicted RBP16.87■□□□□ 0.29
TOP3A-202ENST00000461127 RANBP9Q96S59 729 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 LYSMD1Q96S90 227 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 TIMM29Q9BSF4 260 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 MLPHQ9BV36 600 aaPredicted RBP16.87■□□□□ 0.29
TOP3A-202ENST00000461127 TUBB2BQ9BVA1 445 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 NLNQ9BYT8 704 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 UNKQ9C0B0 810 aaKnown RBP16.87■□□□□ 0.29
TOP3A-202ENST00000461127 DEF6Q9H4E7 631 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 TRIM39Q9HCM9 518 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 ARFGAP3Q9NP61 516 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 AGPAT4Q9NRZ5 378 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 KCND1Q9NSA2 647 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 TCFL5Q9UL49 500 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 RPL26L1Q9UNX3 145 aaKnown RBP16.87■□□□□ 0.29
TOP3A-202ENST00000461127 CHKBQ9Y259 395 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 ADGRG1Q9Y653 693 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 ADGRG4Q8IZF6 3080 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 HEATR9A2RTY3 570 aa16.86■□□□□ 0.29
TOP3A-202ENST00000461127 OR52A4PA6NMU1 304 aa16.86■□□□□ 0.29
TOP3A-202ENST00000461127 IDSP22304 550 aa16.86■□□□□ 0.29
TOP3A-202ENST00000461127 AMPD1P23109 780 aa16.86■□□□□ 0.29
TOP3A-202ENST00000461127 RPL10P27635 214 aaKnown RBP16.86■□□□□ 0.29
TOP3A-202ENST00000461127 PRKCIP41743 596 aa16.86■□□□□ 0.29
TOP3A-202ENST00000461127 HALP42357 657 aa16.86■□□□□ 0.29
TOP3A-202ENST00000461127 HSD11B2P80365 405 aa16.86■□□□□ 0.29
TOP3A-202ENST00000461127 RAPSNQ13702 412 aa16.86■□□□□ 0.29
TOP3A-202ENST00000461127 AGAP9Q5VTM2 703 aa16.86■□□□□ 0.29
TOP3A-202ENST00000461127 SP5Q6BEB4 398 aaPredicted RBP16.86■□□□□ 0.29
TOP3A-202ENST00000461127 ACAD10Q6JQN1 1059 aa16.86■□□□□ 0.29
TOP3A-202ENST00000461127 WASH2PQ6VEQ5 465 aa16.86■□□□□ 0.29
TOP3A-202ENST00000461127 LRRTM4Q86VH4 590 aa16.86■□□□□ 0.29
TOP3A-202ENST00000461127 CCDC42Q96M95 316 aa16.86■□□□□ 0.29
TOP3A-202ENST00000461127 CD180Q99467 661 aa16.86■□□□□ 0.29
TOP3A-202ENST00000461127 AGPAT1Q99943 283 aa16.86■□□□□ 0.29
TOP3A-202ENST00000461127 SPATA16Q9BXB7 569 aa16.86■□□□□ 0.29
TOP3A-202ENST00000461127 HAUS4Q9H6D7 363 aa16.86■□□□□ 0.29
TOP3A-202ENST00000461127 SLC23A2Q9UGH3 650 aa16.86■□□□□ 0.29
TOP3A-202ENST00000461127 UBA6A0AVT1 1052 aaPredicted RBP16.85■□□□□ 0.29
TOP3A-202ENST00000461127 TLCD2A6NGC4 264 aa16.85■□□□□ 0.29
TOP3A-202ENST00000461127 F5H423 210 aaPredicted RBP16.85■□□□□ 0.29
TOP3A-202ENST00000461127 CHUKO15111 745 aa16.85■□□□□ 0.29
TOP3A-202ENST00000461127 VCLP18206 1134 aa16.85■□□□□ 0.29
TOP3A-202ENST00000461127 FECHP22830 423 aa16.85■□□□□ 0.29
TOP3A-202ENST00000461127 PPP1CAP62136 330 aa16.85■□□□□ 0.29
TOP3A-202ENST00000461127 MAMLD1Q13495 774 aa16.85■□□□□ 0.29
TOP3A-202ENST00000461127 ZXDCQ2QGD7 858 aaPredicted RBP16.85■□□□□ 0.29
TOP3A-202ENST00000461127 DNTTIP2Q5QJE6 756 aaKnown RBP16.85■□□□□ 0.29
TOP3A-202ENST00000461127 TMTC4Q5T4D3 741 aa16.85■□□□□ 0.29
TOP3A-202ENST00000461127 HGSNATQ68CP4 663 aa16.85■□□□□ 0.29
TOP3A-202ENST00000461127 PPP1R2P3Q6NXS1 205 aa16.85■□□□□ 0.29
TOP3A-202ENST00000461127 RAB43Q86YS6 212 aa16.85■□□□□ 0.29
TOP3A-202ENST00000461127 LRRC49Q8IUZ0 686 aa16.85■□□□□ 0.29
TOP3A-202ENST00000461127 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.85■□□□□ 0.29
TOP3A-202ENST00000461127 TEX26Q8N6G2 289 aa16.85■□□□□ 0.29
TOP3A-202ENST00000461127 ST6GALNAC3Q8NDV1 305 aa16.85■□□□□ 0.29
TOP3A-202ENST00000461127 LPCAT1Q8NF37 534 aa16.85■□□□□ 0.29
TOP3A-202ENST00000461127 UBE2Q2Q8WVN8 375 aa16.85■□□□□ 0.29
TOP3A-202ENST00000461127 CPT1BQ92523 772 aa16.85■□□□□ 0.29
TOP3A-202ENST00000461127 TM9SF4Q92544 642 aa16.85■□□□□ 0.29
TOP3A-202ENST00000461127 LRFN5Q96NI6 719 aa16.85■□□□□ 0.29
TOP3A-202ENST00000461127 CHP1Q99653 195 aa16.85■□□□□ 0.29
TOP3A-202ENST00000461127 MAP3K3Q99759 626 aa16.85■□□□□ 0.29
TOP3A-202ENST00000461127 TDRD1Q9BXT4 1180 aaKnown RBP16.85■□□□□ 0.29
TOP3A-202ENST00000461127 PCDH9Q9HC56 1237 aa16.85■□□□□ 0.29
TOP3A-202ENST00000461127 ETNK2Q9NVF9 386 aa16.85■□□□□ 0.29
TOP3A-202ENST00000461127 CROCCQ5TZA2 2017 aa16.85■□□□□ 0.29
TOP3A-202ENST00000461127 CELSR1Q9NYQ6 3014 aa16.84■□□□□ 0.29
TOP3A-202ENST00000461127 PIKFYVEQ9Y2I7 2098 aa16.84■□□□□ 0.29
TOP3A-202ENST00000461127 SOWAHDA6NJG2 315 aa16.84■□□□□ 0.29
TOP3A-202ENST00000461127 MEN1O00255 615 aa16.84■□□□□ 0.29
TOP3A-202ENST00000461127 LRRTM2O43300 516 aa16.84■□□□□ 0.29
TOP3A-202ENST00000461127 AKR1B10O60218 316 aa16.84■□□□□ 0.29
TOP3A-202ENST00000461127 BRAFP15056 766 aa16.84■□□□□ 0.29
TOP3A-202ENST00000461127 CYLC1P35663 651 aaPredicted RBP16.84■□□□□ 0.29
TOP3A-202ENST00000461127 GLRBP48167 497 aa16.84■□□□□ 0.29
TOP3A-202ENST00000461127 CCZ1BP86790 482 aa16.84■□□□□ 0.29
TOP3A-202ENST00000461127 CCZ1P86791 482 aaPredicted RBP16.84■□□□□ 0.29
TOP3A-202ENST00000461127 ATP1A4Q13733 1029 aa16.84■□□□□ 0.29
TOP3A-202ENST00000461127 PLCL1Q15111 1095 aa16.84■□□□□ 0.29
TOP3A-202ENST00000461127 ZRSR2Q15696 482 aaKnown RBP16.84■□□□□ 0.29
TOP3A-202ENST00000461127 ZNF648Q5T619 568 aaPredicted RBP16.84■□□□□ 0.29
TOP3A-202ENST00000461127 CYP4V2Q6ZWL3 525 aaPredicted RBP16.84■□□□□ 0.29
TOP3A-202ENST00000461127 ADGRG6Q86SQ4 1221 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms