RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 SYNCRIPO60506 623 aaKnown RBP2.31□□□□□ -2.04
SYPL1-203ENST00000460770 NKX2-2O95096 273 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 NADKO95544 446 aaPredicted RBP2.31□□□□□ -2.04
SYPL1-203ENST00000460770 RAF1P04049 648 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 TPOP07202 933 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 H1F0P07305 194 aaKnown RBP2.31□□□□□ -2.04
SYPL1-203ENST00000460770 PAX3P23760 479 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 MMP15P51511 669 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 GALNT2Q10471 571 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 CDC16Q13042 620 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 RAPSNQ13702 412 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 DHX8Q14562 1220 aaKnown RBP2.31□□□□□ -2.04
SYPL1-203ENST00000460770 ZRSR2Q15696 482 aaKnown RBP2.31□□□□□ -2.04
SYPL1-203ENST00000460770 ADIPOQQ15848 244 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 CCNG2Q16589 344 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 SNAI3Q3KNW1 292 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 CXorf66Q5JRM2 361 aaPredicted RBP2.31□□□□□ -2.04
SYPL1-203ENST00000460770 C10orf62Q5T681 223 aaPredicted RBP2.31□□□□□ -2.04
SYPL1-203ENST00000460770 LCE3AQ5TA76 89 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 ZNF774Q6NX45 483 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 CDC73Q6P1J9 531 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 LRRTM1Q86UE6 522 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 CCDC190Q86UF4 302 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 CPOQ8IVL8 374 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 HACE1Q8IYU2 909 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 TMTC2Q8N394 836 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 HM13Q8TCT9 377 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 FAM149B1Q96BN6 582 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 EVI5LQ96CN4 794 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 SLC47A1Q96FL8 570 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 SLC39A13Q96H72 371 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 MAELQ96JY0 434 aaKnown RBP2.31□□□□□ -2.04
SYPL1-203ENST00000460770 SMC6Q96SB8 1091 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 PIGQQ9BRB3 760 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 GPATCH1Q9BRR8 931 aaKnown RBP2.31□□□□□ -2.04
SYPL1-203ENST00000460770 ZNF71Q9NQZ8 489 aaPredicted RBP2.31□□□□□ -2.04
SYPL1-203ENST00000460770 OLFML3Q9NRN5 406 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 PRR34Q9NV39 138 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 COPG2Q9UBF2 871 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 INTS6Q9UL03 887 aaKnown RBP2.31□□□□□ -2.04
SYPL1-203ENST00000460770 SLC7A7Q9UM01 511 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 TMEM184BQ9Y519 407 aaPredicted RBP2.31□□□□□ -2.04
SYPL1-203ENST00000460770 TAF1P21675 1872 aa2.31□□□□□ -2.04
SYPL1-203ENST00000460770 IGHV4-61A0A0C4DH41 118 aa2.3□□□□□ -2.04
SYPL1-203ENST00000460770 CCDC189A1A4V9 331 aa2.3□□□□□ -2.04
SYPL1-203ENST00000460770 C1orf226A1L170 272 aa2.3□□□□□ -2.04
SYPL1-203ENST00000460770 EIF3FO00303 357 aaPredicted RBP2.3□□□□□ -2.04
SYPL1-203ENST00000460770 IFRD1O00458 451 aaPredicted RBP2.3□□□□□ -2.04
SYPL1-203ENST00000460770 SEC14L2O76054 403 aa2.3□□□□□ -2.04
SYPL1-203ENST00000460770 ZFAND5O76080 213 aa2.3□□□□□ -2.04
SYPL1-203ENST00000460770 IPO7O95373 1038 aaKnown RBP2.3□□□□□ -2.04
SYPL1-203ENST00000460770 IGHV4-59P01825 116 aa2.3□□□□□ -2.04
SYPL1-203ENST00000460770 HNRNPA1P09651 372 aaKnown RBP eCLIP2.3□□□□□ -2.04
SYPL1-203ENST00000460770 IL7RP16871 459 aa2.3□□□□□ -2.04
SYPL1-203ENST00000460770 KRTAP12-2P59991 146 aa2.3□□□□□ -2.04
SYPL1-203ENST00000460770 GOLGA8DPQ0D2H9 430 aa2.3□□□□□ -2.04
SYPL1-203ENST00000460770 PTP4A2Q12974 167 aa2.3□□□□□ -2.04
SYPL1-203ENST00000460770 HNRNPDQ14103 355 aaKnown RBP2.3□□□□□ -2.04
SYPL1-203ENST00000460770 RALBP1Q15311 655 aa2.3□□□□□ -2.04
SYPL1-203ENST00000460770 GRAMD1BQ3KR37 738 aa2.3□□□□□ -2.04
SYPL1-203ENST00000460770 CDONQ4KMG0 1287 aa2.3□□□□□ -2.04
SYPL1-203ENST00000460770 FASTKD1Q53R41 847 aaKnown RBP2.3□□□□□ -2.04
SYPL1-203ENST00000460770 HSP90AB4PQ58FF6 505 aa2.3□□□□□ -2.04
SYPL1-203ENST00000460770 FAM69AQ5T7M9 428 aa2.3□□□□□ -2.04
SYPL1-203ENST00000460770 WLSQ5T9L3 541 aa2.3□□□□□ -2.04
SYPL1-203ENST00000460770 ZDHHC20Q5W0Z9 365 aa2.3□□□□□ -2.04
SYPL1-203ENST00000460770 PSRC1Q6PGN9 363 aaPredicted RBP2.3□□□□□ -2.04
SYPL1-203ENST00000460770 TMEM178AQ8NBL3 297 aa2.3□□□□□ -2.04
SYPL1-203ENST00000460770 MOAP1Q96BY2 351 aa2.3□□□□□ -2.04
SYPL1-203ENST00000460770 HERPUD2Q9BSE4 406 aa2.3□□□□□ -2.04
SYPL1-203ENST00000460770 SMC4Q9NTJ3 1288 aa2.3□□□□□ -2.04
SYPL1-203ENST00000460770 RCC2Q9P258 522 aaKnown RBP2.3□□□□□ -2.04
SYPL1-203ENST00000460770 MAN1B1Q9UKM7 699 aa2.3□□□□□ -2.04
SYPL1-203ENST00000460770 KLK13Q9UKR3 277 aa2.3□□□□□ -2.04
SYPL1-203ENST00000460770 NOTCH2Q04721 2471 aa2.29□□□□□ -2.04
SYPL1-203ENST00000460770 OR6C76A6NM76 312 aa2.29□□□□□ -2.04
SYPL1-203ENST00000460770 KLF11O14901 512 aa2.29□□□□□ -2.04
SYPL1-203ENST00000460770 ATP2A1O14983 1001 aa2.29□□□□□ -2.04
SYPL1-203ENST00000460770 NPHP1O15259 732 aa2.29□□□□□ -2.04
SYPL1-203ENST00000460770 TNFSF14O43557 240 aa2.29□□□□□ -2.04
SYPL1-203ENST00000460770 TMCC2O75069 709 aa2.29□□□□□ -2.04
SYPL1-203ENST00000460770 WDHD1O75717 1129 aaPredicted RBP2.29□□□□□ -2.04
SYPL1-203ENST00000460770 CDC123O75794 336 aaPredicted RBP2.29□□□□□ -2.04
SYPL1-203ENST00000460770 DNAH10OSP0CZ25 163 aa2.29□□□□□ -2.04
SYPL1-203ENST00000460770 CKMT2P17540 419 aa2.29□□□□□ -2.04
SYPL1-203ENST00000460770 CCT5P48643 541 aa2.29□□□□□ -2.04
SYPL1-203ENST00000460770 HUNKP57058 714 aa2.29□□□□□ -2.04
SYPL1-203ENST00000460770 CDR2Q01850 454 aa2.29□□□□□ -2.04
SYPL1-203ENST00000460770 NAB2Q15742 525 aa2.29□□□□□ -2.04
SYPL1-203ENST00000460770 PRICKLE4Q2TBC4 344 aa2.29□□□□□ -2.04
SYPL1-203ENST00000460770 NSUN5P2Q63ZY6 315 aa2.29□□□□□ -2.04
SYPL1-203ENST00000460770 LDHAL6AQ6ZMR3 332 aa2.29□□□□□ -2.04
SYPL1-203ENST00000460770 Q6ZSR9 355 aa2.29□□□□□ -2.04
SYPL1-203ENST00000460770 SDCCAG8Q86SQ7 713 aaPredicted RBP2.29□□□□□ -2.04
SYPL1-203ENST00000460770 LMNTD2Q8IXW0 634 aa2.29□□□□□ -2.04
SYPL1-203ENST00000460770 RNF168Q8IYW5 571 aaPredicted RBP2.29□□□□□ -2.04
SYPL1-203ENST00000460770 RNF125Q96EQ8 232 aa2.29□□□□□ -2.04
SYPL1-203ENST00000460770 PPP1R13BQ96KQ4 1090 aa2.29□□□□□ -2.04
SYPL1-203ENST00000460770 FOXN4Q96NZ1 517 aa2.29□□□□□ -2.04
SYPL1-203ENST00000460770 NUDCD1Q96RS6 583 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms