RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	APOBEC2	Q9Y235	224 aa	Known RBP	10.08	□□□□□ -0.8
MRPL55-223	ENST00000459783	MAD1L1	Q9Y6D9	718 aa		10.08	□□□□□ -0.8
MRPL55-223	ENST00000459783	TEX264	Q9Y6I9	313 aa		10.08	□□□□□ -0.8
MRPL55-223	ENST00000459783	RPS6KL1	Q9Y6S9	549 aa		10.08	□□□□□ -0.8
MRPL55-223	ENST00000459783	MGAT4D	A6NG13	374 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	OR52A4P	A6NMU1	304 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	IQCF5	A8MTL0	148 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783		E7ESA3	106 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	NTN3	O00634	580 aa	Predicted RBP	10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	CD3EAP	O15446	510 aa	Known RBP	10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	B4GAT1	O43505	415 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	TUBB4A	P04350	444 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	GP1BA	P07359	652 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	SLC19A1	P41440	591 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	ELK3	P41970	407 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	DUSP3	P51452	185 aa	Predicted RBP	10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	UBE2I	P63279	158 aa	Known RBP	10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	CBLB	Q13191	982 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	ILK	Q13418	452 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	CRYM	Q14894	314 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	NR1D2	Q14995	579 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	TYSND1	Q2T9J0	566 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	FASTKD1	Q53R41	847 aa	Known RBP	10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	CTSL3P	Q5NE16	218 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	HES3	Q5TGS1	186 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	AGAP9	Q5VTM2	703 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	ARMC3	Q5W041	872 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	METRNL	Q641Q3	311 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	DUS1L	Q6P1R4	473 aa	Known RBP	10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	ABRAXAS1	Q6UWZ7	409 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	TMPRSS7	Q7RTY8	843 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	SPRED1	Q7Z699	444 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	PCGF5	Q86SE9	256 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	AMZ2	Q86W34	360 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	DENND6A	Q8IWF6	608 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	MMGT1	Q8N4V1	131 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	GPR150	Q8NGU9	434 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	OR2L2	Q8NH16	312 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	KIF18A	Q8NI77	898 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	SEC14L1	Q92503	715 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	LPGAT1	Q92604	370 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	DCUN1D1	Q96GG9	259 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	RMDN2	Q96LZ7	410 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	TTC25	Q96NG3	672 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	CNTNAP3B	Q96NU0	1288 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	EBNA1BP2	Q99848	306 aa	Known RBP	10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	SCNM1	Q9BWG6	230 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	CNTNAP3	Q9BZ76	1288 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	P2RY12	Q9H244	342 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	WHRN	Q9P202	907 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	SLC17A6	Q9P2U8	582 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	LRIT1	Q9P2V4	623 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	DMGDH	Q9UI17	866 aa	Known RBP	10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	PSMD13	Q9UNM6	376 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	CHMP2B	Q9UQN3	213 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	FAM169A	Q9Y6X4	670 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	BPTF	Q12830	3046 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	ASXL3	Q9C0F0	2248 aa		10.07	□□□□□ -0.8
MRPL55-223	ENST00000459783	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	EPG5	Q9HCE0	2579 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783		A0A1W2PNU3	283 aa	Predicted RBP	10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	PDZK1P1	A8MUH7	402 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	CFAP99	D6REC4	459 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	NUDT21	O43809	227 aa	Known RBP	10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	USP1	O94782	785 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	S1PR4	O95977	384 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	GLB1	P16278	677 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	PGAM1	P18669	254 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	PDHA2	P29803	388 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	CSF2RB	P32927	897 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	NSG1	P42857	185 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	FASLG	P48023	281 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	PREP	P48147	710 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	RPIA	P49247	311 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	OR1D5	P58170	312 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	CCL7	P80098	99 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	CFHR1	Q03591	330 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	CAMK2B	Q13554	666 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	HIF1A	Q16665	826 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	UBAP2	Q5T6F2	1119 aa	Known RBP	10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	STEAP4	Q687X5	459 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	NEPRO	Q6NW34	567 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	TRMT10B	Q6PF06	316 aa	Known RBP	10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	WASH2P	Q6VEQ5	465 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	UNC5A	Q6ZN44	842 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	MAATS1	Q7Z4T9	603 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	CILP2	Q8IUL8	1156 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	ANKMY2	Q8IV38	441 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	KRT222	Q8N1A0	295 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783		Q8N9G6	341 aa	Predicted RBP	10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	FBXO25	Q8TCJ0	367 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	HM13	Q8TCT9	377 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	HEXDC	Q8WVB3	486 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	NAT6	Q93015	286 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	ART4	Q93070	314 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	ZNF514	Q96K75	400 aa	Predicted RBP	10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	BIRC8	Q96P09	236 aa		10.06	□□□□□ -0.8
MRPL55-223	ENST00000459783	INSM2	Q96T92	566 aa	Predicted RBP	10.06	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms