RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 KCNJ13O60928 360 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 CDH16O75309 829 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 S100A6P06703 90 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 ITGA2BP08514 1039 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 TBC1D3HP0C7X1 549 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 ACADMP11310 421 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 KRT15P19012 456 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 DMWDQ09019 674 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 NFATC2Q13469 925 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 LRRC32Q14392 662 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 FASTKD1Q53R41 847 aaKnown RBP10.21□□□□□ -0.77
USP39-210ENST00000459775 TBC1D3GQ6DHY5 549 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 TBC1D3CQ6IPX1 549 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 AFTPHQ6ULP2 937 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 NAPRTQ6XQN6 538 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 DBX2Q6ZNG2 339 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 ZC3HC1Q86WB0 502 aaKnown RBP10.21□□□□□ -0.77
USP39-210ENST00000459775 SLC41A1Q8IVJ1 513 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 SRRM1Q8IYB3 904 aaKnown RBP10.21□□□□□ -0.77
USP39-210ENST00000459775 TBC1D3Q8IZP1 549 aaPredicted RBP10.21□□□□□ -0.77
USP39-210ENST00000459775 ZNF398Q8TD17 642 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 MGARPQ8TDB4 240 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 CDKL2Q92772 493 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 MCMBPQ9BTE3 642 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 SPATA16Q9BXB7 569 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 ROPN1BQ9BZX4 212 aaPredicted RBP10.21□□□□□ -0.77
USP39-210ENST00000459775 FAM83DQ9H4H8 585 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 ROPN1Q9HAT0 212 aaPredicted RBP10.21□□□□□ -0.77
USP39-210ENST00000459775 MBNL1Q9NR56 388 aaKnown RBP10.21□□□□□ -0.77
USP39-210ENST00000459775 CYP8B1Q9UNU6 501 aa10.21□□□□□ -0.77
USP39-210ENST00000459775 A0A1W2PQU0 124 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 RAD51BO15315 384 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 ATP8B1O43520 1251 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 SPAG7O75391 227 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 SOD1P00441 154 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 MTHFD1P11586 935 aaKnown RBP10.21□□□□□ -0.78
USP39-210ENST00000459775 PMLP29590 882 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 FMO4P31512 558 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 SPAM1P38567 509 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 GP5P40197 560 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 HADHAP40939 763 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 FRG1Q14331 258 aaKnown RBP10.21□□□□□ -0.78
USP39-210ENST00000459775 TMEM52BQ4KMG9 183 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 PIM3Q86V86 326 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 EXOC3L1Q86VI1 746 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 SERPINA9Q86WD7 417 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 CEP97Q8IW35 865 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 CNTN4Q8IWV2 1026 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 SPATA6LQ8N4H0 392 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 TSTD1Q8NFU3 115 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 CXorf40AQ8TE69 158 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 STON2Q8WXE9 905 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 AP2M1Q96CW1 435 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 VPS39Q96JC1 886 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 COG8Q96MW5 612 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 RBBP8Q99708 897 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 OLFM1Q99784 485 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 CPNE1Q99829 537 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 TXNDC16Q9P2K2 825 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 SLC24A2Q9UI40 661 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 SLC39A10Q9ULF5 831 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 PRSS21Q9Y6M0 314 aa10.21□□□□□ -0.78
USP39-210ENST00000459775 CHURC1-FNTBB4DL54 471 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 PLOD2O00469 737 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 WNT9AO14904 365 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 SLC31A1O15431 190 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 PHGDHO43175 533 aaKnown RBP10.2□□□□□ -0.78
USP39-210ENST00000459775 RNGTTO60942 597 aaKnown RBP10.2□□□□□ -0.78
USP39-210ENST00000459775 RASGRP1O95267 797 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 ALDOAP04075 364 aaKnown RBP10.2□□□□□ -0.78
USP39-210ENST00000459775 IVLP07476 585 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 ZNF30P17039 623 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 RANBP1P43487 201 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 DGKEP52429 567 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 CDKN2DP55273 166 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 PDE1BQ01064 536 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 RELQ04864 619 aaPredicted RBP10.2□□□□□ -0.78
USP39-210ENST00000459775 ELP6Q0PNE2 266 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 TUBA3CQ13748 450 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 MPP2Q14168 576 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 HENMT1Q5T8I9 393 aaKnown RBP10.2□□□□□ -0.78
USP39-210ENST00000459775 DET1Q7L5Y6 550 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 CLDN23Q96B33 292 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 NRBF2Q96F24 287 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 DTD2Q96FN9 168 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 ATP6V1G3Q96LB4 118 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 LENG8Q96PV6 779 aaPredicted RBP10.2□□□□□ -0.78
USP39-210ENST00000459775 NSRP1Q9H0G5 558 aaKnown RBP10.2□□□□□ -0.78
USP39-210ENST00000459775 CHRDQ9H2X0 955 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 PKD2L2Q9NZM6 624 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 LGALS13Q9UHV8 139 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 TMED5Q9Y3A6 229 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 LAMA1P25391 3075 aa10.2□□□□□ -0.78
USP39-210ENST00000459775 FRYLO94915 3013 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 EME2A4GXA9 379 aaPredicted RBP10.19□□□□□ -0.78
USP39-210ENST00000459775 GOLGA6L10A6NI86 522 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 H7C0S8 307 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 TPP1O14773 563 aa10.19□□□□□ -0.78
USP39-210ENST00000459775 PLRG1O43660 514 aaKnown RBP10.19□□□□□ -0.78
USP39-210ENST00000459775 RFPL1O75677 317 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms