RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 TBC1D10AQ9BXI6 508 aa15.83■□□□□ 0.12
COL7A1-203ENST00000459756 CRLS1Q9UJA2 301 aa15.83■□□□□ 0.12
COL7A1-203ENST00000459756 ZNF148Q9UQR1 794 aa15.83■□□□□ 0.12
COL7A1-203ENST00000459756 MGAQ8IWI9 3026 aa15.82■□□□□ 0.12
COL7A1-203ENST00000459756 OR52A4PA6NMU1 304 aa15.82■□□□□ 0.12
COL7A1-203ENST00000459756 C9orf172C9J069 976 aa15.82■□□□□ 0.12
COL7A1-203ENST00000459756 IFNB1P01574 187 aa15.82■□□□□ 0.12
COL7A1-203ENST00000459756 FGF3P11487 239 aaPredicted RBP15.82■□□□□ 0.12
COL7A1-203ENST00000459756 TPH1P17752 444 aa15.82■□□□□ 0.12
COL7A1-203ENST00000459756 CD82P27701 267 aa15.82■□□□□ 0.12
COL7A1-203ENST00000459756 TMPRSS15P98073 1019 aa15.82■□□□□ 0.12
COL7A1-203ENST00000459756 BCL7AQ4VC05 210 aa15.82■□□□□ 0.12
COL7A1-203ENST00000459756 SNX20Q7Z614 316 aa15.82■□□□□ 0.12
COL7A1-203ENST00000459756 PLXDC1Q8IUK5 500 aa15.82■□□□□ 0.12
COL7A1-203ENST00000459756 NXPE1Q8N323 547 aa15.82■□□□□ 0.12
COL7A1-203ENST00000459756 TAB3Q8N5C8 712 aaPredicted RBP15.82■□□□□ 0.12
COL7A1-203ENST00000459756 HEXDCQ8WVB3 486 aa15.82■□□□□ 0.12
COL7A1-203ENST00000459756 C1orf54Q8WWF1 131 aa15.82■□□□□ 0.12
COL7A1-203ENST00000459756 SGF29Q96ES7 293 aa15.82■□□□□ 0.12
COL7A1-203ENST00000459756 DNAJC1Q96KC8 554 aaKnown RBP15.82■□□□□ 0.12
COL7A1-203ENST00000459756 TAAR9Q96RI9 348 aa15.82■□□□□ 0.12
COL7A1-203ENST00000459756 UBL7Q96S82 380 aaPredicted RBP15.82■□□□□ 0.12
COL7A1-203ENST00000459756 SLC40A1Q9NP59 571 aa15.82■□□□□ 0.12
COL7A1-203ENST00000459756 NLE1Q9NVX2 485 aaPredicted RBP15.82■□□□□ 0.12
COL7A1-203ENST00000459756 WDR37Q9Y2I8 494 aa15.82■□□□□ 0.12
COL7A1-203ENST00000459756 PCDHGA3Q9Y5H0 932 aa15.82■□□□□ 0.12
COL7A1-203ENST00000459756 SLC30A1Q9Y6M5 507 aa15.82■□□□□ 0.12
COL7A1-203ENST00000459756 AHCTF1Q8WYP5 2266 aa15.82■□□□□ 0.12
COL7A1-203ENST00000459756 TEX51A0A1B0GUA7 166 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 MGAT4DA6NG13 374 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 B4E171 279 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 CFAP99D6REC4 459 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 H7C0S8 307 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 UBXN7O94888 489 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 GAS8O95995 478 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 LIPCP11150 499 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 MC4RP32245 332 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 FDFT1P37268 417 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 TSPAN7P41732 249 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 MN1Q10571 1320 aaPredicted RBP15.81■□□□□ 0.12
COL7A1-203ENST00000459756 SNX1Q13596 522 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 SEPT6Q14141 434 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 POU6F1Q14863 301 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 CLCA4Q14CN2 919 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 CCNG2Q16589 344 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 SNAP47Q5SQN1 464 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 METRNLQ641Q3 311 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 FAM83HQ6ZRV2 1179 aaPredicted RBP15.81■□□□□ 0.12
COL7A1-203ENST00000459756 DET1Q7L5Y6 550 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 ARHGAP22Q7Z5H3 698 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 CCDC89Q8N998 374 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 STYXQ8WUJ0 223 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 LINC00615Q96LM1 132 aaPredicted RBP15.81■□□□□ 0.12
COL7A1-203ENST00000459756 COPS8Q99627 209 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 DDA1Q9BW61 102 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 ASPSCR1Q9BZE9 553 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 CPNE5Q9HCH3 593 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 FOXJ2Q9P0K8 574 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 ACSL5Q9ULC5 683 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 ZKSCAN5Q9Y2L8 839 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 PPP2R2CQ9Y2T4 447 aa15.81■□□□□ 0.12
COL7A1-203ENST00000459756 MROH6A6NGR9 719 aa15.8■□□□□ 0.12
COL7A1-203ENST00000459756 A8MU76 341 aa15.8■□□□□ 0.12
COL7A1-203ENST00000459756 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.8■□□□□ 0.12
COL7A1-203ENST00000459756 E7EVH7 732 aa15.8■□□□□ 0.12
COL7A1-203ENST00000459756 CCL22O00626 93 aa15.8■□□□□ 0.12
COL7A1-203ENST00000459756 SUN1O94901 812 aa15.8■□□□□ 0.12
COL7A1-203ENST00000459756 PBLDP30039 288 aaPredicted RBP15.8■□□□□ 0.12
COL7A1-203ENST00000459756 LMAN1P49257 510 aa15.8■□□□□ 0.12
COL7A1-203ENST00000459756 RAB15P59190 212 aa15.8■□□□□ 0.12
COL7A1-203ENST00000459756 VAC14Q08AM6 782 aa15.8■□□□□ 0.12
COL7A1-203ENST00000459756 CDH17Q12864 832 aa15.8■□□□□ 0.12
COL7A1-203ENST00000459756 GPR18Q14330 331 aa15.8■□□□□ 0.12
COL7A1-203ENST00000459756 NFE2L1Q14494 772 aa15.8■□□□□ 0.12
COL7A1-203ENST00000459756 SOWAHCQ53LP3 525 aaPredicted RBP15.8■□□□□ 0.12
COL7A1-203ENST00000459756 DRICH1Q6PGQ1 229 aaPredicted RBP15.8■□□□□ 0.12
COL7A1-203ENST00000459756 FAM129CQ86XR2 697 aa15.8■□□□□ 0.12
COL7A1-203ENST00000459756 BEND7Q8N7W2 519 aaPredicted RBP15.8■□□□□ 0.12
COL7A1-203ENST00000459756 OR2L2Q8NH16 312 aa15.8■□□□□ 0.12
COL7A1-203ENST00000459756 SNRNP27Q8WVK2 155 aaKnown RBP15.8■□□□□ 0.12
COL7A1-203ENST00000459756 MAIP1Q8WWC4 291 aa15.8■□□□□ 0.12
COL7A1-203ENST00000459756 CCNL2Q96S94 520 aaPredicted RBP15.8■□□□□ 0.12
COL7A1-203ENST00000459756 TLR10Q9BXR5 811 aa15.8■□□□□ 0.12
COL7A1-203ENST00000459756 FAM96AQ9H5X1 160 aa15.8■□□□□ 0.12
COL7A1-203ENST00000459756 ETNK1Q9HBU6 452 aa15.8■□□□□ 0.12
COL7A1-203ENST00000459756 SLC39A1Q9NY26 324 aa15.8■□□□□ 0.12
COL7A1-203ENST00000459756 OGFRQ9NZT2 677 aa15.8■□□□□ 0.12
COL7A1-203ENST00000459756 PAK5Q9P286 719 aa15.8■□□□□ 0.12
COL7A1-203ENST00000459756 PCDHB11Q9Y5F2 797 aa15.8■□□□□ 0.12
COL7A1-203ENST00000459756 IGLV3-16A0A075B6K0 115 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 TRBV5-4A0A0C4DH59 114 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 EFCAB7A8K855 629 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 TOX3O15405 576 aaPredicted RBP15.79■□□□□ 0.12
COL7A1-203ENST00000459756 SGTAO43765 313 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 C9P02748 559 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 ANKRD34CP0C6C1 535 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 ATP1B2P14415 290 aaPredicted RBP15.79■□□□□ 0.12
COL7A1-203ENST00000459756 TYRP1P17643 537 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 AMD1P17707 334 aa15.79■□□□□ 0.12
COL7A1-203ENST00000459756 PSMA3P25788 255 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms