RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 FAM86C2PA6NEL3 165 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 BTNL10A8MVZ5 291 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 RSL1D1O76021 490 aaKnown RBP19.46■□□□□ 0.71
SNX27-204ENST00000458013 CLPXO76031 633 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 CLDN9O95484 217 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 SERPINA3P01011 423 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 NUDT17P0C025 328 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 PSEN1P49768 467 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 CLCQ05315 142 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 DPYSQ14117 519 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 ZYG11AQ6WRX3 759 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 DHRS1Q96LJ7 313 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 GBA3Q9H227 469 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 PLIN3O60664 434 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 PPP1R11O60927 126 aaPredicted RBP19.46■□□□□ 0.71
SNX27-204ENST00000458013 CHRNA4P43681 627 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 TMPRSS9Q7Z410 1059 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 CBR4Q8N4T8 237 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 OR10H4Q8NGA5 316 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 SNX7Q9UNH6 387 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 ABCA9Q8IUA7 1624 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 GNPDA1P46926 289 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 SP3Q02447 781 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 PLPPR4Q7Z2D5 763 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 TBC1D21Q8IYX1 336 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 SLC44A1Q8WWI5 657 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 CPT1BQ92523 772 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 SIPA1Q96FS4 1042 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 DNAJC28Q9NX36 388 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 RIPK3Q9Y572 518 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 ZNF135P52742 658 aaPredicted RBP19.46■□□□□ 0.71
SNX27-204ENST00000458013 MSANTD2Q6P1R3 559 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 USP50Q70EL3 339 aaPredicted RBP19.46■□□□□ 0.71
SNX27-204ENST00000458013 TOP6BLQ8N6T0 577 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 KCNN2Q9H2S1 579 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 PRPF19Q9UMS4 504 aaKnown RBP19.46■□□□□ 0.71
SNX27-204ENST00000458013 MED31Q9Y3C7 131 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 CLUHO75153 1309 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 ELOVL7A1L3X0 281 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 A8MUA0 341 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 AQP4P55087 323 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 GDF10P55107 478 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 DCST1Q5T197 706 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 TMPRSS11AQ6ZMR5 421 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 C12orf4Q9NQ89 552 aa19.46■□□□□ 0.71
SNX27-204ENST00000458013 A0A0X1KG70 313 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 SLC35F4A4IF30 521 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 MTHFD1P11586 935 aaKnown RBP19.45■□□□□ 0.7
SNX27-204ENST00000458013 TACR2P21452 398 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 SPAM1P38567 509 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 RAB25P57735 213 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 OR8H1Q8NGG4 311 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 GRHL3Q8TE85 626 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 PIWIL1Q96J94 861 aaKnown RBP19.45■□□□□ 0.7
SNX27-204ENST00000458013 RHOJQ9H4E5 214 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 SP140LQ9H930 580 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 FAM240BA0A1B0GVZ2 78 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 VIPP01282 170 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 ITGB1P05556 798 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 CTSOP43234 321 aaPredicted RBP19.45■□□□□ 0.7
SNX27-204ENST00000458013 HSDL1Q3SXM5 330 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 PRSS55Q6UWB4 352 aaPredicted RBP19.45■□□□□ 0.7
SNX27-204ENST00000458013 SNX20Q7Z614 316 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.45■□□□□ 0.7
SNX27-204ENST00000458013 PRAMEF33A0A0G2JMD5 474 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 H3BNH8 94 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 PRAMEF10O60809 474 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 GCATO75600 419 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 MASP1P48740 699 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 RPIAP49247 311 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 TLR1Q15399 786 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 ZNF567Q8N184 647 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 IFT46Q9NQC8 304 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 LMO2P25791 158 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 SDC2P34741 201 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 AVPR1BP47901 424 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 TEX44Q53QW1 395 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 ARL13AQ5H913 290 aaPredicted RBP19.45■□□□□ 0.7
SNX27-204ENST00000458013 KCTD8Q6ZWB6 473 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 SERPINA9Q86WD7 417 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 TMEM27Q9HBJ8 222 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 PRDM8Q9NQV8 689 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 KCTD5Q9NXV2 234 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 RAPGEFL1Q9UHV5 662 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 DPPA5A6NC42 116 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 THRBP10828 461 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 MAPK12P53778 367 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 DRG2P55039 364 aaKnown RBP19.45■□□□□ 0.7
SNX27-204ENST00000458013 ZACNQ401N2 412 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 SLC26A9Q7LBE3 791 aa19.45■□□□□ 0.7
SNX27-204ENST00000458013 WDR12Q9GZL7 423 aaKnown RBP19.45■□□□□ 0.7
SNX27-204ENST00000458013 LYNP07948 512 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 PKMP14618 531 aaKnown RBP19.44■□□□□ 0.7
SNX27-204ENST00000458013 CACNG1Q06432 222 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 TMEM214Q6NUQ4 689 aaKnown RBP19.44■□□□□ 0.7
SNX27-204ENST00000458013 GRIP1Q9Y3R0 1128 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 OR51F1A6NGY5 319 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 CDK14O94921 469 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 APODP05090 189 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 CBX5P45973 191 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms