RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 PREBQ9HCU5 417 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 DDX18Q9NVP1 670 aaKnown RBP18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 DMTF1Q9Y222 760 aa18.15■□□□□ 0.5
SEMA3B-209ENST00000456560 MYOCOSA0A1B0GUC4 107 aa18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 SLC22A3O75751 556 aa18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 RPS3P23396 243 aaKnown RBP eCLIP18.14■□□□□ 0.492e-8■■■□□ 17
SEMA3B-209ENST00000456560 KCNK10P57789 538 aa18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 Q6ZSR9 355 aa18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 CAMK1DQ8IU85 385 aa18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 FAM217AQ8IXS0 508 aa18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 CDYL2Q8N8U2 506 aa18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 VPS33AQ96AX1 596 aa18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 OSBPL11Q9BXB4 747 aa18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 RBM38Q9H0Z9 239 aaKnown RBP18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 HIPK3Q9H422 1215 aa18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 ZNF334Q9HCZ1 680 aaPredicted RBP18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 RIC8BQ9NVN3 520 aa18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 ZIM2Q9NZV7 527 aa18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 RNF11Q9Y3C5 154 aa18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 OLFM2O95897 454 aa18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 CA5AP35218 305 aa18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 PRKCQQ04759 706 aa18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 NFYCQ13952 458 aa18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 PAGE3Q5JUK9 113 aa18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 LETMD1Q6P1Q0 360 aa18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 SBSNQ6UWP8 590 aa18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 SPPL2CQ8IUH8 684 aa18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 TMEM199Q8N511 208 aa18.14■□□□□ 0.49
SEMA3B-209ENST00000456560 GIPC1O14908 333 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 IL12AP29459 219 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 POLR2JP52435 117 aaKnown RBP18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 APOFQ13790 326 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 C18orf21Q32NC0 220 aaPredicted RBP18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 PPP4R4Q6NUP7 873 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 ADAMTSL2Q86TH1 951 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 SERPINA9Q86WD7 417 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 APCDD1Q8J025 514 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 ARL14EPQ8N8R7 260 aaPredicted RBP18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 DDI1Q8WTU0 396 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 CDK15Q96Q40 435 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 CIB1Q99828 191 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 HERC2P3Q9BVR0 1158 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 IL21Q9HBE4 155 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 GALNT8Q9NY28 637 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 EGFL7Q9UHF1 273 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 LEF1Q9UJU2 399 aaPredicted RBP18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 DHRS12A0PJE2 317 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 ARHGAP10A1A4S6 786 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 FAM234BA2RU67 622 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 TYW5A2RUC4 315 aaKnown RBP18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 ARPC2O15144 300 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 PSMC3P17980 439 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 ATN1P54259 1190 aaPredicted RBP18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 INPP5AQ14642 412 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 CDKN3Q16667 212 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 CARM1Q86X55 608 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 PTRH1Q86Y79 214 aaKnown RBP18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 TCEAL8Q8IYN2 117 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 SLC39A11Q8N1S5 342 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 C19orf43Q9BQ61 176 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 C1orf50Q9BV19 199 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 MUC13Q9H3R2 512 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 PADI4Q9UM07 663 aa18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 TNPO3Q9Y5L0 923 aaKnown RBP18.13■□□□□ 0.49
SEMA3B-209ENST00000456560 CCDC154A6NI56 674 aa18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 GOLGA8CPA6NN73 597 aa18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 OR7A17O14581 309 aa18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 PRRG1O14668 218 aa18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 HTRA2O43464 458 aaPredicted RBP18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 SMAD6O43541 496 aaKnown RBP18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 SYNCRIPO60506 623 aaKnown RBP18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 BAIAP3O94812 1187 aa18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 PARNO95453 639 aaKnown RBP18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 ZNF7P17097 686 aaPredicted RBP18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 GSK3BP49841 420 aa18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 CDH18Q13634 790 aa18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 TBCELQ5QJ74 424 aa18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 ANKRD12Q6UB98 2062 aa18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 FAM151BQ6UXP7 276 aa18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 GOLGA7Q7Z5G4 137 aa18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 ADGRG5Q8IZF4 528 aa18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 SFRP1Q8N474 314 aa18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 DCBLD1Q8N8Z6 715 aa18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 PROKR1Q8TCW9 393 aa18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 PPWD1Q96BP3 646 aaKnown RBP18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 TRIM8Q9BZR9 551 aa18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 TM6SF2Q9BZW4 377 aa18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 HEBP1Q9NRV9 189 aa18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 EVLQ9UI08 416 aaPredicted RBP18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 INSL5Q9Y5Q6 135 aa18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 CPQQ9Y646 472 aa18.12■□□□□ 0.49
SEMA3B-209ENST00000456560 TRBV5-4A0A0C4DH59 114 aa18.11■□□□□ 0.49
SEMA3B-209ENST00000456560 AKAP10O43572 662 aa18.11■□□□□ 0.49
SEMA3B-209ENST00000456560 PRAMEF1O95521 474 aa18.11■□□□□ 0.49
SEMA3B-209ENST00000456560 BMP1P13497 986 aa18.11■□□□□ 0.49
SEMA3B-209ENST00000456560 CKMT2P17540 419 aa18.11■□□□□ 0.49
SEMA3B-209ENST00000456560 HTR6P50406 440 aa18.11■□□□□ 0.49
SEMA3B-209ENST00000456560 EPHB3P54753 998 aa18.11■□□□□ 0.49
SEMA3B-209ENST00000456560 HPCAP84074 193 aa18.11■□□□□ 0.49
SEMA3B-209ENST00000456560 RABL3Q5HYI8 236 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms