RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 LDLRAP1Q5SW96 308 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 LYPLAL1Q5VWZ2 237 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 FAM45BPQ6NSW5 357 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 C16orf46Q6P387 395 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 BLOC1S3Q6QNY0 202 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 MACC1Q6ZN28 852 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 ARMCX6Q7L4S7 300 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 BMP8AQ7Z5Y6 402 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 C11orf96Q7Z7L8 435 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 CLEC14AQ86T13 490 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 PHYKPLQ8IUZ5 450 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 CENPLQ8N0S6 344 aaPredicted RBP10.82□□□□□ -0.68
SCN9A-205ENST00000454569 OR13H1Q8NG92 308 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 MDM1Q8TC05 714 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 FAM45AQ8TCE6 357 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 CD200R1Q8TD46 325 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 KCTD4Q8WVF5 259 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 SCG3Q8WXD2 468 aaKnown RBP10.82□□□□□ -0.68
SCN9A-205ENST00000454569 SNX19Q92543 992 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 NXNL1Q96CM4 212 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 MTBPQ96DY7 904 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 SLC6A18Q96N87 628 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 GPR78Q96P69 363 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 PRR14Q9BWN1 585 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 CLPBQ9H078 707 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 STMN4Q9H169 189 aaPredicted RBP10.82□□□□□ -0.68
SCN9A-205ENST00000454569 SARS2Q9NP81 518 aaKnown RBP10.82□□□□□ -0.68
SCN9A-205ENST00000454569 SLC17A7Q9P2U7 560 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 SLC23A2Q9UGH3 650 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 TSR3Q9UJK0 312 aaKnown RBP10.82□□□□□ -0.68
SCN9A-205ENST00000454569 EMCNQ9ULC0 261 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 PLEKHM1Q9Y4G2 1056 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 ST14Q9Y5Y6 855 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 CACNA1EQ15878 2313 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 CDK14O94921 469 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 ASMTLO95671 621 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 TSPAN12O95859 305 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 ESR1P03372 595 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 BRAFP15056 766 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 STMN1P16949 149 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 CHRM3P20309 590 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 TEAD1P28347 426 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 HPDP32754 393 aaPredicted RBP10.82□□□□□ -0.68
SCN9A-205ENST00000454569 RPA3P35244 121 aaPredicted RBP10.82□□□□□ -0.68
SCN9A-205ENST00000454569 KCNC1P48547 511 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 SERPINB8P50452 374 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 RAB10P61026 200 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 PLA2G4EQ3MJ16 856 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 ZNF658BQ4V348 819 aaPredicted RBP10.82□□□□□ -0.68
SCN9A-205ENST00000454569 USP39Q53GS9 565 aaKnown RBP10.82□□□□□ -0.68
SCN9A-205ENST00000454569 RNF187Q5TA31 235 aaPredicted RBP10.82□□□□□ -0.68
SCN9A-205ENST00000454569 LGSNQ5TDP6 509 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 PTRHD1Q6GMV3 140 aaKnown RBP10.82□□□□□ -0.68
SCN9A-205ENST00000454569 CRTC3Q6UUV7 619 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 WDR5BQ86VZ2 330 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 VRK3Q8IV63 474 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 SLC22A18ASQ8N1D0 253 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 ANKK1Q8NFD2 765 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 GABPB2Q8TAK5 448 aaPredicted RBP10.82□□□□□ -0.68
SCN9A-205ENST00000454569 HSPA12BQ96MM6 686 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 COL25A1Q9BXS0 654 aaPredicted RBP10.82□□□□□ -0.68
SCN9A-205ENST00000454569 WDR26Q9H7D7 661 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 MLXIPLQ9NP71 852 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 IGSF5Q9NSI5 407 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 TMEM216Q9P0N5 145 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 FAM8A1Q9UBU6 413 aa10.82□□□□□ -0.68
SCN9A-205ENST00000454569 CABIN1Q9Y6J0 2220 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 H3BMM5 538 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 FPGTO14772 594 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 CHUKO15111 745 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 SBK3P0C264 359 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 MYCLP1P12525 358 aaPredicted RBP10.81□□□□□ -0.68
SCN9A-205ENST00000454569 ATP5DP30049 168 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 DNAJC3Q13217 504 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 ACSBG2Q5FVE4 666 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 LYPD8Q6UX82 237 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 Q6ZSR6 202 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 RAPH1Q70E73 1250 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 ABI3BPQ7Z7G0 1075 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 CPNE9Q8IYJ1 553 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 TMEM151AQ8N4L1 468 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 DENND6BQ8NEG7 585 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 C1orf216Q8TAB5 229 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 FAM76AQ8TAV0 307 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 DENND1AQ8TEH3 1009 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 EEF1AKMT1Q8WVE0 214 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 DCUN1D1Q96GG9 259 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 UBXN10Q96LJ8 280 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 GPAMQ9HCL2 828 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 FGF22Q9HCT0 170 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 KCTD5Q9NXV2 234 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 GNPTGQ9UJJ9 305 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 RUVBL2Q9Y230 463 aaKnown RBP10.81□□□□□ -0.68
SCN9A-205ENST00000454569 CDYLQ9Y232 598 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 DHRS7Q9Y394 339 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 PCDHB1Q9Y5F3 818 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 HS3ST3A1Q9Y663 406 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 PCM1Q15154 2024 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 RALGAPA1Q6GYQ0 2036 aa10.81□□□□□ -0.68
SCN9A-205ENST00000454569 CCDC163A0A0D9SF12 145 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms