RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 C4orf17Q53FE4 359 aa23.25■■□□□ 1.31
LYSMD2-202ENST00000454181 DNTTIP2Q5QJE6 756 aaKnown RBP23.25■■□□□ 1.31
LYSMD2-202ENST00000454181 NPNTQ6UXI9 565 aa23.25■■□□□ 1.31
LYSMD2-202ENST00000454181 BZW1Q7L1Q6 419 aaKnown RBP23.25■■□□□ 1.31
LYSMD2-202ENST00000454181 C11orf96Q7Z7L8 435 aa23.25■■□□□ 1.31
LYSMD2-202ENST00000454181 LUZP1Q86V48 1076 aa23.25■■□□□ 1.31
LYSMD2-202ENST00000454181 TADA1Q96BN2 335 aa23.25■■□□□ 1.31
LYSMD2-202ENST00000454181 SLC41A2Q96JW4 573 aa23.25■■□□□ 1.31
LYSMD2-202ENST00000454181 PSMG3-AS1Q96PY0 264 aa23.25■■□□□ 1.31
LYSMD2-202ENST00000454181 FGF21Q9NSA1 209 aa23.25■■□□□ 1.31
LYSMD2-202ENST00000454181 UBP1Q9NZI7 540 aa23.25■■□□□ 1.31
LYSMD2-202ENST00000454181 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.25■■□□□ 1.31
LYSMD2-202ENST00000454181 TMPRSS11EQ9UL52 423 aa23.25■■□□□ 1.31
LYSMD2-202ENST00000454181 NENFQ9UMX5 172 aa23.25■■□□□ 1.31
LYSMD2-202ENST00000454181 PSMD13Q9UNM6 376 aa23.25■■□□□ 1.31
LYSMD2-202ENST00000454181 TIAF1O95411 115 aa23.24■■□□□ 1.31
LYSMD2-202ENST00000454181 TMEM253P0C7T8 217 aa23.24■■□□□ 1.31
LYSMD2-202ENST00000454181 PPP1CAP62136 330 aa23.24■■□□□ 1.31
LYSMD2-202ENST00000454181 XRCC4Q13426 336 aa23.24■■□□□ 1.31
LYSMD2-202ENST00000454181 RPE65Q16518 533 aa23.24■■□□□ 1.31
LYSMD2-202ENST00000454181 LDLRAP1Q5SW96 308 aa23.24■■□□□ 1.31
LYSMD2-202ENST00000454181 B4GALNT4Q76KP1 1039 aa23.24■■□□□ 1.31
LYSMD2-202ENST00000454181 KMT5CQ86Y97 462 aa23.24■■□□□ 1.31
LYSMD2-202ENST00000454181 ZNF514Q96K75 400 aaPredicted RBP23.24■■□□□ 1.31
LYSMD2-202ENST00000454181 OLFM3Q96PB7 478 aa23.24■■□□□ 1.31
LYSMD2-202ENST00000454181 CD180Q99467 661 aa23.24■■□□□ 1.31
LYSMD2-202ENST00000454181 FAM153AQ9UHL3 310 aa23.24■■□□□ 1.31
LYSMD2-202ENST00000454181 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.24■■□□□ 1.31
LYSMD2-202ENST00000454181 USP9YO00507 2555 aaPredicted RBP23.24■■□□□ 1.31
LYSMD2-202ENST00000454181 DNAJB5O75953 348 aa23.23■■□□□ 1.31
LYSMD2-202ENST00000454181 EBLN1P0CF75 366 aa23.23■■□□□ 1.31
LYSMD2-202ENST00000454181 PTPN4P29074 926 aa23.23■■□□□ 1.31
LYSMD2-202ENST00000454181 SPAM1P38567 509 aa23.23■■□□□ 1.31
LYSMD2-202ENST00000454181 PGDP52209 483 aa23.23■■□□□ 1.31
LYSMD2-202ENST00000454181 DMPKQ09013 629 aa23.23■■□□□ 1.31
LYSMD2-202ENST00000454181 UGT8Q16880 541 aa23.23■■□□□ 1.31
LYSMD2-202ENST00000454181 ARMC6Q6NXE6 501 aa23.23■■□□□ 1.31
LYSMD2-202ENST00000454181 TMEM220Q6QAJ8 160 aa23.23■■□□□ 1.31
LYSMD2-202ENST00000454181 SYVN1Q86TM6 617 aa23.23■■□□□ 1.31
LYSMD2-202ENST00000454181 TTC30BQ8N4P2 665 aa23.23■■□□□ 1.31
LYSMD2-202ENST00000454181 SLC35G2Q8TBE7 412 aa23.23■■□□□ 1.31
LYSMD2-202ENST00000454181 RNF25Q96BH1 459 aaPredicted RBP23.23■■□□□ 1.31
LYSMD2-202ENST00000454181 TEKT5Q96M29 485 aa23.23■■□□□ 1.31
LYSMD2-202ENST00000454181 MAP3K3Q99759 626 aa23.23■■□□□ 1.31
LYSMD2-202ENST00000454181 SLC25A23Q9BV35 468 aa23.23■■□□□ 1.31
LYSMD2-202ENST00000454181 IL26Q9NPH9 171 aa23.23■■□□□ 1.31
LYSMD2-202ENST00000454181 ACSS2Q9NR19 701 aa23.23■■□□□ 1.31
LYSMD2-202ENST00000454181 IMP3Q9NV31 184 aaKnown RBP23.23■■□□□ 1.31
LYSMD2-202ENST00000454181 SEMA5BQ9P283 1151 aa23.23■■□□□ 1.31
LYSMD2-202ENST00000454181 DNMT3AQ9Y6K1 912 aaPredicted RBP23.23■■□□□ 1.31
LYSMD2-202ENST00000454181 RELNP78509 3460 aa23.23■■□□□ 1.31
LYSMD2-202ENST00000454181 AKR1B10O60218 316 aa23.22■■□□□ 1.31
LYSMD2-202ENST00000454181 AGFG2O95081 481 aa23.22■■□□□ 1.31
LYSMD2-202ENST00000454181 TPM3P06753 285 aa23.22■■□□□ 1.31
LYSMD2-202ENST00000454181 TNNT1P13805 278 aa23.22■■□□□ 1.31
LYSMD2-202ENST00000454181 ARHGAP25P42331 645 aa23.22■■□□□ 1.31
LYSMD2-202ENST00000454181 HSD11B2P80365 405 aa23.22■■□□□ 1.31
LYSMD2-202ENST00000454181 CHRNA6Q15825 494 aa23.22■■□□□ 1.31
LYSMD2-202ENST00000454181 TMTC4Q5T4D3 741 aa23.22■■□□□ 1.31
LYSMD2-202ENST00000454181 FHL5Q5TD97 284 aa23.22■■□□□ 1.31
LYSMD2-202ENST00000454181 FAM199XQ6PEV8 388 aaPredicted RBP23.22■■□□□ 1.31
LYSMD2-202ENST00000454181 FAM151BQ6UXP7 276 aa23.22■■□□□ 1.31
LYSMD2-202ENST00000454181 SLC25A41Q8N5S1 370 aa23.22■■□□□ 1.31
LYSMD2-202ENST00000454181 RASGEF1AQ8N9B8 481 aa23.22■■□□□ 1.31
LYSMD2-202ENST00000454181 GPR150Q8NGU9 434 aa23.22■■□□□ 1.31
LYSMD2-202ENST00000454181 DTX3LQ8TDB6 740 aa23.22■■□□□ 1.31
LYSMD2-202ENST00000454181 MR1Q95460 341 aa23.22■■□□□ 1.31
LYSMD2-202ENST00000454181 ZNHIT6Q9NWK9 470 aaKnown RBP23.22■■□□□ 1.31
LYSMD2-202ENST00000454181 HRASLS2Q9NWW9 162 aa23.22■■□□□ 1.31
LYSMD2-202ENST00000454181 HACD3Q9P035 362 aa23.22■■□□□ 1.31
LYSMD2-202ENST00000454181 IFNKQ9P0W0 207 aa23.22■■□□□ 1.31
LYSMD2-202ENST00000454181 PKP3Q9Y446 797 aa23.22■■□□□ 1.31
LYSMD2-202ENST00000454181 ZNF106Q9H2Y7 1883 aaKnown RBP23.22■■□□□ 1.31
LYSMD2-202ENST00000454181 GLYATL1P3A0A0U1RQE8 302 aa23.21■■□□□ 1.31
LYSMD2-202ENST00000454181 TLCD2A6NGC4 264 aa23.21■■□□□ 1.31
LYSMD2-202ENST00000454181 C3orf70A6NLC5 250 aaPredicted RBP23.21■■□□□ 1.31
LYSMD2-202ENST00000454181 UGT1A9O60656 530 aa23.21■■□□□ 1.31
LYSMD2-202ENST00000454181 CPNE3O75131 537 aaKnown RBP23.21■■□□□ 1.31
LYSMD2-202ENST00000454181 UGT1A6P19224 532 aa23.21■■□□□ 1.31
LYSMD2-202ENST00000454181 UGT1A1P22309 533 aa23.21■■□□□ 1.31
LYSMD2-202ENST00000454181 UGT1A4P22310 534 aa23.21■■□□□ 1.31
LYSMD2-202ENST00000454181 PTPN3P26045 913 aa23.21■■□□□ 1.31
LYSMD2-202ENST00000454181 PBLDP30039 288 aaPredicted RBP23.21■■□□□ 1.31
LYSMD2-202ENST00000454181 WNT3AP56704 352 aa23.21■■□□□ 1.31
LYSMD2-202ENST00000454181 ITGA9Q13797 1035 aa23.21■■□□□ 1.31
LYSMD2-202ENST00000454181 OOSP2Q86WS3 158 aa23.21■■□□□ 1.31
LYSMD2-202ENST00000454181 TMEM126BQ8IUX1 230 aa23.21■■□□□ 1.31
LYSMD2-202ENST00000454181 BEND7Q8N7W2 519 aaPredicted RBP23.21■■□□□ 1.31
LYSMD2-202ENST00000454181 CPT1CQ8TCG5 803 aa23.21■■□□□ 1.31
LYSMD2-202ENST00000454181 TFB1MQ8WVM0 346 aaKnown RBP23.21■■□□□ 1.31
LYSMD2-202ENST00000454181 TRIM55Q9BYV6 548 aa23.21■■□□□ 1.31
LYSMD2-202ENST00000454181 UGT1A7Q9HAW7 530 aa23.21■■□□□ 1.31
LYSMD2-202ENST00000454181 UGT1A10Q9HAW8 530 aa23.21■■□□□ 1.31
LYSMD2-202ENST00000454181 UGT1A8Q9HAW9 530 aa23.21■■□□□ 1.31
LYSMD2-202ENST00000454181 DDX56Q9NY93 547 aaKnown RBP23.21■■□□□ 1.31
LYSMD2-202ENST00000454181 FARSAQ9Y285 508 aaKnown RBP23.21■■□□□ 1.31
LYSMD2-202ENST00000454181 RP1L1Q8IWN7 2480 aaPredicted RBP23.2■■□□□ 1.3
LYSMD2-202ENST00000454181 OR5K3A6NET4 321 aa23.2■■□□□ 1.3
LYSMD2-202ENST00000454181 OR2AG2A6NM03 316 aa23.2■■□□□ 1.3
LYSMD2-202ENST00000454181 SCRG1O75711 98 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms