RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 CDKN3Q16667 212 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 C16orf89Q6UX73 402 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 PACS1Q6VY07 963 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 NELL2Q99435 816 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 AGAP2Q99490 1192 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 FKBPLQ9UIM3 349 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 APPL1Q9UKG1 709 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 MMP17Q9ULZ9 603 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 SLC30A1Q9Y6M5 507 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 HMX2A2RU54 273 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 SHISA7A6NL88 538 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 TMEM114B3SHH9 223 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 CD3EAPO15446 510 aaKnown RBP15.68■□□□□ 0.1
SNX17-204ENST00000453453 DNTTP04053 509 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 PYGLP06737 847 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 ELFN1P0C7U0 828 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 KITP10721 976 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 BMP1P13497 986 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 OGNP20774 298 aaKnown RBP15.68■□□□□ 0.1
SNX17-204ENST00000453453 LHCGRP22888 699 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 MC4RP32245 332 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 SPAM1P38567 509 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 RPS14P62263 151 aaKnown RBP15.68■□□□□ 0.1
SNX17-204ENST00000453453 HPCAP84074 193 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 SEMG2Q02383 582 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 APOFQ13790 326 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 CCDC153Q494R4 210 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 AARS2Q5JTZ9 985 aaKnown RBP15.68■□□□□ 0.1
SNX17-204ENST00000453453 LPCAT4Q643R3 524 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 SATL1Q86VE3 508 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 TICAM1Q8IUC6 712 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 CBARPQ8N350 705 aaPredicted RBP15.68■□□□□ 0.1
SNX17-204ENST00000453453 GPR150Q8NGU9 434 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 DCUN1D1Q96GG9 259 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 OMDQ99983 421 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 C20orf27Q9GZN8 174 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 SLC17A6Q9P2U8 582 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 MARCOQ9UEW3 520 aaPredicted RBP15.68■□□□□ 0.1
SNX17-204ENST00000453453 FBXO5Q9UKT4 447 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 SCML1Q9UN30 329 aa15.68■□□□□ 0.1
SNX17-204ENST00000453453 FNDC3AQ9Y2H6 1198 aaKnown RBP15.68■□□□□ 0.1
SNX17-204ENST00000453453 A0A0U1RQS6 177 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 PSMD11O00231 422 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 VILLO15195 856 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 MID1O15344 667 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 UGT1A9O60656 530 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 PROCP04070 461 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 COX4I1P13073 169 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 PMLP29590 882 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 PPARGP37231 505 aaPredicted RBP15.67■□□□□ 0.1
SNX17-204ENST00000453453 SLC1A2P43004 574 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 STC1P52823 247 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 ABCE1P61221 599 aaKnown RBP15.67■□□□□ 0.1
SNX17-204ENST00000453453 CNTN1Q12860 1018 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 BMPR2Q13873 1038 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 CYLC2Q14093 348 aaPredicted RBP15.67■□□□□ 0.1
SNX17-204ENST00000453453 UBXN2BQ14CS0 331 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 PCLAFQ15004 111 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 HERC3Q15034 1050 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 GRAMD1BQ3KR37 738 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 ZRANB3Q5FWF4 1079 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 KIAA1211LQ6NV74 962 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 CACUL1Q86Y37 369 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 C2CD4AQ8NCU7 369 aaPredicted RBP15.67■□□□□ 0.1
SNX17-204ENST00000453453 GANCQ8TET4 914 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 SREK1Q8WXA9 508 aaKnown RBP15.67■□□□□ 0.1
SNX17-204ENST00000453453 ISL2Q96A47 359 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 CNDP1Q96KN2 507 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 RBBP8Q99708 897 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 UGT1A7Q9HAW7 530 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 UGT1A10Q9HAW8 530 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 UGT1A8Q9HAW9 530 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 MID2Q9UJV3 735 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 EMCNQ9ULC0 261 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 VPS9D1Q9Y2B5 631 aa15.67■□□□□ 0.1
SNX17-204ENST00000453453 GLYATL1P3A0A0U1RQE8 302 aa15.66■□□□□ 0.1
SNX17-204ENST00000453453 A0A1W2PQF6 199 aa15.66■□□□□ 0.1
SNX17-204ENST00000453453 KANSL1LA0AUZ9 987 aa15.66■□□□□ 0.1
SNX17-204ENST00000453453 RGSL1A5PLK6 1076 aa15.66■□□□□ 0.1
SNX17-204ENST00000453453 OR51F1A6NGY5 319 aa15.66■□□□□ 0.1
SNX17-204ENST00000453453 H0Y858 1186 aa15.66■□□□□ 0.1
SNX17-204ENST00000453453 ZNF195O14628 629 aa15.66■□□□□ 0.1
SNX17-204ENST00000453453 ATG13O75143 517 aa15.66■□□□□ 0.1
SNX17-204ENST00000453453 TFAP2AP05549 437 aa15.66■□□□□ 0.1
SNX17-204ENST00000453453 C1SP09871 688 aa15.66■□□□□ 0.1
SNX17-204ENST00000453453 BPIP17213 487 aa15.66■□□□□ 0.1
SNX17-204ENST00000453453 ITGALP20701 1170 aa15.66■□□□□ 0.1
SNX17-204ENST00000453453 P2RY2P41231 377 aa15.66■□□□□ 0.1
SNX17-204ENST00000453453 CD151P48509 253 aa15.66■□□□□ 0.1
SNX17-204ENST00000453453 METAP1P53582 386 aa15.66■□□□□ 0.1
SNX17-204ENST00000453453 NR1H2P55055 460 aa15.66■□□□□ 0.1
SNX17-204ENST00000453453 STARD6P59095 220 aa15.66■□□□□ 0.1
SNX17-204ENST00000453453 PTSQ03393 145 aa15.66■□□□□ 0.1
SNX17-204ENST00000453453 CACNG1Q06432 222 aa15.66■□□□□ 0.1
SNX17-204ENST00000453453 CTBP1Q13363 440 aa15.66■□□□□ 0.1
SNX17-204ENST00000453453 N4BP2L1Q5TBK1 243 aaPredicted RBP15.66■□□□□ 0.1
SNX17-204ENST00000453453 GALNT7Q86SF2 657 aa15.66■□□□□ 0.1
SNX17-204ENST00000453453 CILP2Q8IUL8 1156 aa15.66■□□□□ 0.1
SNX17-204ENST00000453453 DENND6AQ8IWF6 608 aa15.66■□□□□ 0.1
SNX17-204ENST00000453453 RAVER1Q8IY67 606 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms