RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 OR5K3A6NET4 321 aa13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 ZNF487B1APH4 448 aa13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 TMEM63AO94886 807 aa13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 CYP1A2P05177 515 aa13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 CD48P09326 243 aa13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 PYGMP11217 842 aa13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 HMGCLP35914 325 aa13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 PTGIRP43119 386 aa13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 TMEM115Q12893 351 aaPredicted RBP13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 PLA2G4EQ3MJ16 856 aa13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 FIGNQ5HY92 759 aa13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 ALS2CLQ60I27 953 aa13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 HIST2H2BCQ6DN03 193 aa13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 VSIG1Q86XK7 387 aa13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 SLC34A3Q8N130 599 aa13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 KCTD6Q8NC69 237 aa13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 CCNYQ8ND76 341 aa13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 SYN2Q92777 582 aaPredicted RBP13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 MR1Q95460 341 aa13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 IMP4Q96G21 291 aaKnown RBP13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 SMAD5Q99717 465 aaKnown RBP13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 NAT10Q9H0A0 1025 aaKnown RBP13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 TRABDQ9H4I3 376 aa13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 CASS4Q9NQ75 786 aa13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 IGSF5Q9NSI5 407 aa13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 GPR83Q9NYM4 423 aa13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 SNX7Q9UNH6 387 aa13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 BTRCQ9Y297 605 aa13.98□□□□□ -0.17
LYSMD3-202ENST00000453259 CENPEQ02224 2701 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 MATN2O00339 956 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 LDLRP01130 860 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 IGHEP01854 428 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 EBLN1P0CF75 366 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 BPIP17213 487 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 VAV2P52735 878 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 DRG2P55039 364 aaKnown RBP13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 CDK18Q07002 472 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 GALNT3Q14435 633 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 PLCL1Q15111 1095 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 ZRANB3Q5FWF4 1079 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 LDLRAP1Q5SW96 308 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 E4F1Q66K89 784 aaPredicted RBP13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 SLC6A19Q695T7 634 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 NT5DC3Q86UY8 548 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 OOSP2Q86WS3 158 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 IQCKQ8N0W5 287 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 Q8NA96 180 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 TADA1Q96BN2 335 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 ZNF501Q96CX3 271 aaPredicted RBP13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 MAP3K3Q99759 626 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 THAP2Q9H0W7 228 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 SLC25A51Q9H1U9 297 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 CBX8Q9HC52 389 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 ARFGAP3Q9NP61 516 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 DTLQ9NZJ0 730 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 TCFL5Q9UL49 500 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 SLC5A6Q9Y289 635 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 HIVEP3Q5T1R4 2406 aa13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 PRRC2CQ9Y520 2896 aaKnown RBP13.97□□□□□ -0.17
LYSMD3-202ENST00000453259 MEN1O00255 615 aa13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 NDST3O95803 873 aa13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 ALPPP05187 535 aa13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 DCTP40126 519 aa13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 SSR1P43307 286 aaKnown RBP13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 RPS18P62269 152 aaKnown RBP13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 GBE1Q04446 702 aa13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 ADCY2Q08462 1091 aa13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 GPS2Q13227 327 aa13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 KCNAB1Q14722 419 aa13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 RPE65Q16518 533 aa13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 ZNF648Q5T619 568 aaPredicted RBP13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 VWA5B1Q5TIE3 1220 aa13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 ARMC6Q6NXE6 501 aa13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 FAM199XQ6PEV8 388 aaPredicted RBP13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 DSELQ8IZU8 1212 aa13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 CNTD1Q8N815 330 aa13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 C5orf34Q96MH7 638 aa13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 C17orf62Q9BQA9 187 aa13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 DHRS4Q9BTZ2 278 aa13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 HRASLS2Q9NWW9 162 aa13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 SHOC2Q9UQ13 582 aa13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 WDR37Q9Y2I8 494 aa13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 PADI2Q9Y2J8 665 aa13.96□□□□□ -0.17
LYSMD3-202ENST00000453259 ABCA12Q86UK0 2595 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 A1L4Q6 167 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 KCNK1O00180 336 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 MAP3K7O43318 606 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 CD63P08962 238 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 RNF224P0DH78 156 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 MTHFD1P11586 935 aaKnown RBP13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 HADHAP40939 763 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 CHAF1BQ13112 559 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 ITGA9Q13797 1035 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 PDK1Q15118 436 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 EIF2S3LQ2VIR3 472 aaKnown RBP13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 ATP13A5Q4VNC0 1218 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 KHDC1Q4VXA5 237 aaKnown RBP13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 METRNLQ641Q3 311 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 IGFL3Q6UXB1 125 aa13.95□□□□□ -0.18
LYSMD3-202ENST00000453259 RAB43Q86YS6 212 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms