RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 MSH2P43246 934 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 MMP13P45452 471 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 GABRB2P47870 512 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 CLCN5P51795 746 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 SLC18A2Q05940 514 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 GALNT3Q14435 633 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 SHROOM1Q2M3G4 852 aaPredicted RBP4.39□□□□□ -1.71
LINC00393-202ENST00000452852 Q4G0T1 1027 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 KRBOX4Q5JUW0 171 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 TATDN1Q6P1N9 297 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 CFAP77Q6ZQR2 320 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 GET4Q7L5D6 327 aaPredicted RBP4.39□□□□□ -1.71
LINC00393-202ENST00000452852 HAPLN4Q86UW8 402 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 WDR5BQ86VZ2 330 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 CCDC25Q86WR0 208 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 THNSL1Q8IYQ7 743 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 CHCHD4Q8N4Q1 142 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 PRSS3P2Q8NHM4 247 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.39□□□□□ -1.71
LINC00393-202ENST00000452852 TRIB2Q92519 343 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 ATOH1Q92858 354 aaPredicted RBP4.39□□□□□ -1.71
LINC00393-202ENST00000452852 ARHGEF26Q96DR7 871 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 C12orf42Q96LP6 360 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 FIZ1Q96SL8 496 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 GAD1Q99259 594 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 CCDC106Q9BWC9 280 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 C1QTNF5Q9BXJ0 243 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 FAM129AQ9BZQ8 928 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 SPRTNQ9H040 489 aaPredicted RBP4.39□□□□□ -1.71
LINC00393-202ENST00000452852 PORCNQ9H237 461 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 HRH4Q9H3N8 390 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 RPAP3Q9H6T3 665 aaPredicted RBP4.39□□□□□ -1.71
LINC00393-202ENST00000452852 XAB2Q9HCS7 855 aaKnown RBP4.39□□□□□ -1.71
LINC00393-202ENST00000452852 MCM9Q9NXL9 1143 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 WSB2Q9NYS7 404 aaPredicted RBP4.39□□□□□ -1.71
LINC00393-202ENST00000452852 PLEKHB1Q9UF11 243 aaPredicted RBP4.39□□□□□ -1.71
LINC00393-202ENST00000452852 ANAPC5Q9UJX4 755 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 DDX19BQ9UMR2 479 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 R3HDM2Q9Y2K5 976 aaKnown RBP4.39□□□□□ -1.71
LINC00393-202ENST00000452852 ZNF532Q9HCE3 1301 aa4.39□□□□□ -1.71
LINC00393-202ENST00000452852 TYW5A2RUC4 315 aaKnown RBP4.38□□□□□ -1.71
LINC00393-202ENST00000452852 SLC15A5A6NIM6 579 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 SMTNL1A8MU46 457 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 H3BQ06 376 aaPredicted RBP4.38□□□□□ -1.71
LINC00393-202ENST00000452852 C22orf31O95567 290 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 MT-CYBP00156 380 aaPredicted RBP4.38□□□□□ -1.71
LINC00393-202ENST00000452852 ABCB1P08183 1280 aaPredicted RBP4.38□□□□□ -1.71
LINC00393-202ENST00000452852 SRPRAP08240 638 aaKnown RBP4.38□□□□□ -1.71
LINC00393-202ENST00000452852 TMEM11P17152 192 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 TRIM21P19474 475 aaKnown RBP4.38□□□□□ -1.71
LINC00393-202ENST00000452852 PON1P27169 355 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 TLX1P31314 330 aaPredicted RBP4.38□□□□□ -1.71
LINC00393-202ENST00000452852 SHMT1P34896 483 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 PLCD1P51178 756 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 SUOXP51687 545 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 KRTAP10-11P60412 298 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 RBP5P82980 135 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 GHRHRQ02643 423 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 DRAP1Q14919 205 aaPredicted RBP4.38□□□□□ -1.71
LINC00393-202ENST00000452852 TRIP6Q15654 476 aaKnown RBP4.38□□□□□ -1.71
LINC00393-202ENST00000452852 NAB2Q15742 525 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 ADIPOQQ15848 244 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 SYTL3Q4VX76 610 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 VWA5B1Q5TIE3 1220 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 TMEM198Q66K66 360 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 PMS2CLQ68D20 193 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 KRTAP5-11Q6L8G4 156 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 ZSCAN25Q6NSZ9 544 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 CES5AQ6NT32 575 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 TMEM179Q6ZVK1 233 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 TBC1D26Q86UD7 250 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 NOXA1Q86UR1 476 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 UEVLDQ8IX04 471 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 ARL14EPQ8N8R7 260 aaPredicted RBP4.38□□□□□ -1.71
LINC00393-202ENST00000452852 DUSP19Q8WTR2 217 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 SDR42E1Q8WUS8 393 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 TMEM170AQ8WVE7 144 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 MRPS27Q92552 414 aaKnown RBP4.38□□□□□ -1.71
LINC00393-202ENST00000452852 LPAR1Q92633 364 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 PIGKQ92643 395 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 FRG2BQ96QU4 278 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 FCRL5Q96RD9 977 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 FNBP1Q96RU3 617 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 RIOK1Q9BRS2 568 aaKnown RBP4.38□□□□□ -1.71
LINC00393-202ENST00000452852 TUBB6Q9BUF5 446 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 TM2D2Q9BX73 214 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 WDR6Q9NNW5 1121 aaKnown RBP4.38□□□□□ -1.71
LINC00393-202ENST00000452852 PAG1Q9NWQ8 432 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 TUBA8Q9NY65 449 aaPredicted RBP4.38□□□□□ -1.71
LINC00393-202ENST00000452852 HOXC10Q9NYD6 342 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 SELENONQ9NZV5 590 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 FBXO40Q9UH90 709 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 RASAL2Q9UJF2 1139 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 MAFFQ9ULX9 164 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 SLC8A2Q9UPR5 921 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 CARD8Q9Y2G2 431 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 RLFQ13129 1914 aa4.38□□□□□ -1.71
LINC00393-202ENST00000452852 LTBP2Q14767 1821 aa4.37□□□□□ -1.71
LINC00393-202ENST00000452852 TRIM64A6NGJ6 449 aa4.37□□□□□ -1.71
LINC00393-202ENST00000452852 TRIM64BA6NI03 449 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms