RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 PLEKHG4BQ96PX9 1271 aa21.33■■□□□ 1.01
C9orf3-208ENST00000451893 ERP44Q9BS26 406 aa21.33■■□□□ 1.01
C9orf3-208ENST00000451893 FAM129AQ9BZQ8 928 aa21.33■■□□□ 1.01
C9orf3-208ENST00000451893 ZCCHC2Q9C0B9 1178 aaKnown RBP21.33■■□□□ 1.01
C9orf3-208ENST00000451893 B3GNT4Q9C0J1 378 aa21.33■■□□□ 1.01
C9orf3-208ENST00000451893 TRABDQ9H4I3 376 aa21.33■■□□□ 1.01
C9orf3-208ENST00000451893 PRDM8Q9NQV8 689 aa21.33■■□□□ 1.01
C9orf3-208ENST00000451893 FAM114A2Q9NRY5 505 aa21.33■■□□□ 1.01
C9orf3-208ENST00000451893 HACD3Q9P035 362 aa21.33■■□□□ 1.01
C9orf3-208ENST00000451893 TMEM9Q9P0T7 183 aa21.33■■□□□ 1.01
C9orf3-208ENST00000451893 CPNE7Q9UBL6 633 aa21.33■■□□□ 1.01
C9orf3-208ENST00000451893 PKP3Q9Y446 797 aa21.33■■□□□ 1.01
C9orf3-208ENST00000451893 PCYT1BQ9Y5K3 369 aaPredicted RBP21.33■■□□□ 1.01
C9orf3-208ENST00000451893 BAHCC1Q9P281 2608 aa21.33■■□□□ 1
C9orf3-208ENST00000451893 LIASO43766 372 aa21.32■■□□□ 1
C9orf3-208ENST00000451893 VEGFDO43915 354 aa21.32■■□□□ 1
C9orf3-208ENST00000451893 EPHA4P54764 986 aa21.32■■□□□ 1
C9orf3-208ENST00000451893 RAB15P59190 212 aa21.32■■□□□ 1
C9orf3-208ENST00000451893 GUCY2DQ02846 1103 aa21.32■■□□□ 1
C9orf3-208ENST00000451893 LY6DQ14210 128 aa21.32■■□□□ 1
C9orf3-208ENST00000451893 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.32■■□□□ 1
C9orf3-208ENST00000451893 DCAF12Q5T6F0 453 aa21.32■■□□□ 1
C9orf3-208ENST00000451893 ITPRIPL1Q6GPH6 555 aa21.32■■□□□ 1
C9orf3-208ENST00000451893 SNRNP27Q8WVK2 155 aaKnown RBP21.32■■□□□ 1
C9orf3-208ENST00000451893 EID2BQ96D98 161 aa21.32■■□□□ 1
C9orf3-208ENST00000451893 QKIQ96PU8 341 aaKnown RBP eCLIP21.32■■□□□ 1
C9orf3-208ENST00000451893 ASPSCR1Q9BZE9 553 aa21.32■■□□□ 1
C9orf3-208ENST00000451893 EPB41L1Q9H4G0 881 aa21.32■■□□□ 1
C9orf3-208ENST00000451893 NFKBIL1Q9UBC1 381 aaPredicted RBP21.32■■□□□ 1
C9orf3-208ENST00000451893 AHCTF1Q8WYP5 2266 aa21.32■■□□□ 1
C9orf3-208ENST00000451893 FASNP49327 2511 aaKnown RBP21.31■■□□□ 1
C9orf3-208ENST00000451893 TTI1O43156 1089 aa21.31■■□□□ 1
C9orf3-208ENST00000451893 EFSO43281 561 aa21.31■■□□□ 1
C9orf3-208ENST00000451893 FGF3P11487 239 aaPredicted RBP21.31■■□□□ 1
C9orf3-208ENST00000451893 ZNF7P17097 686 aaPredicted RBP21.31■■□□□ 1
C9orf3-208ENST00000451893 AMD1P17707 334 aa21.31■■□□□ 1
C9orf3-208ENST00000451893 SPAM1P38567 509 aa21.31■■□□□ 1
C9orf3-208ENST00000451893 VSNL1P62760 191 aa21.31■■□□□ 1
C9orf3-208ENST00000451893 SLC7A5Q01650 507 aa21.31■■□□□ 1
C9orf3-208ENST00000451893 WASHC5Q12768 1159 aa21.31■■□□□ 1
C9orf3-208ENST00000451893 MPP3Q13368 585 aa21.31■■□□□ 1
C9orf3-208ENST00000451893 SQSTM1Q13501 440 aa21.31■■□□□ 1
C9orf3-208ENST00000451893 TTC27Q6P3X3 843 aa21.31■■□□□ 1
C9orf3-208ENST00000451893 WDR74Q6RFH5 385 aaPredicted RBP21.31■■□□□ 1
C9orf3-208ENST00000451893 ZNF567Q8N184 647 aa21.31■■□□□ 1
C9orf3-208ENST00000451893 SLC35B2Q8TB61 432 aa21.31■■□□□ 1
C9orf3-208ENST00000451893 LRRC45Q96CN5 670 aa21.31■■□□□ 1
C9orf3-208ENST00000451893 FCRL5Q96RD9 977 aa21.31■■□□□ 1
C9orf3-208ENST00000451893 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.31■■□□□ 1
C9orf3-208ENST00000451893 TRHDEQ9UKU6 1024 aa21.31■■□□□ 1
C9orf3-208ENST00000451893 R3HDM2Q9Y2K5 976 aaKnown RBP21.31■■□□□ 1
C9orf3-208ENST00000451893 SPO11Q9Y5K1 396 aa21.31■■□□□ 1
C9orf3-208ENST00000451893 NDC80O14777 642 aa21.3■■□□□ 1
C9orf3-208ENST00000451893 AURKAO14965 403 aa21.3■■□□□ 1
C9orf3-208ENST00000451893 HLA-DPA1P20036 260 aa21.3■■□□□ 1
C9orf3-208ENST00000451893 IDSP22304 550 aa21.3■■□□□ 1
C9orf3-208ENST00000451893 HMGCLP35914 325 aa21.3■■□□□ 1
C9orf3-208ENST00000451893 HALP42357 657 aa21.3■■□□□ 1
C9orf3-208ENST00000451893 GEMP55040 296 aa21.3■■□□□ 1
C9orf3-208ENST00000451893 ADCY2Q08462 1091 aa21.3■■□□□ 1
C9orf3-208ENST00000451893 PRPSAP1Q14558 356 aa21.3■■□□□ 1
C9orf3-208ENST00000451893 SIRPB2Q5JXA9 342 aa21.3■■□□□ 1
C9orf3-208ENST00000451893 DUPD1Q68J44 220 aa21.3■■□□□ 1
C9orf3-208ENST00000451893 PLXDC1Q8IUK5 500 aa21.3■■□□□ 1
C9orf3-208ENST00000451893 ZNF843Q8N446 348 aa21.3■■□□□ 1
C9orf3-208ENST00000451893 BRSK1Q8TDC3 778 aa21.3■■□□□ 1
C9orf3-208ENST00000451893 TTC9Q92623 222 aa21.3■■□□□ 1
C9orf3-208ENST00000451893 TADA1Q96BN2 335 aa21.3■■□□□ 1
C9orf3-208ENST00000451893 CXorf40BQ96DE9 158 aa21.3■■□□□ 1
C9orf3-208ENST00000451893 TIMM29Q9BSF4 260 aa21.3■■□□□ 1
C9orf3-208ENST00000451893 DDA1Q9BW61 102 aa21.3■■□□□ 1
C9orf3-208ENST00000451893 SSUH2Q9Y2M2 353 aa21.3■■□□□ 1
C9orf3-208ENST00000451893 C1QL1O75973 258 aa21.29■■□□□ 1
C9orf3-208ENST00000451893 ANXA9O76027 345 aa21.29■■□□□ 1
C9orf3-208ENST00000451893 EPOP01588 193 aa21.29■■□□□ 1
C9orf3-208ENST00000451893 STIP1P31948 543 aaKnown RBP21.29■■□□□ 1
C9orf3-208ENST00000451893 CD68P34810 354 aaPredicted RBP21.29■■□□□ 1
C9orf3-208ENST00000451893 CLCNKAP51800 687 aa21.29■■□□□ 1
C9orf3-208ENST00000451893 SRSF6Q13247 344 aaKnown RBP21.29■■□□□ 1
C9orf3-208ENST00000451893 XRCC4Q13426 336 aa21.29■■□□□ 1
C9orf3-208ENST00000451893 ITGA9Q13797 1035 aa21.29■■□□□ 1
C9orf3-208ENST00000451893 NOMO1Q15155 1222 aa21.29■■□□□ 1
C9orf3-208ENST00000451893 FAM151BQ6UXP7 276 aa21.29■■□□□ 1
C9orf3-208ENST00000451893 CDKL3Q8IVW4 592 aaPredicted RBP21.29■■□□□ 1
C9orf3-208ENST00000451893 CCDC89Q8N998 374 aa21.29■■□□□ 1
C9orf3-208ENST00000451893 ACTL9Q8TC94 416 aa21.29■■□□□ 1
C9orf3-208ENST00000451893 TEFMQ96QE5 360 aaKnown RBP21.29■■□□□ 1
C9orf3-208ENST00000451893 VPS35Q96QK1 796 aa21.29■■□□□ 1
C9orf3-208ENST00000451893 TBC1D10AQ9BXI6 508 aa21.29■■□□□ 1
C9orf3-208ENST00000451893 OCIAD1Q9NX40 245 aa21.29■■□□□ 1
C9orf3-208ENST00000451893 ZNF148Q9UQR1 794 aa21.29■■□□□ 1
C9orf3-208ENST00000451893 B3GALT1Q9Y5Z6 326 aa21.29■■□□□ 1
C9orf3-208ENST00000451893 GLYATL1P3A0A0U1RQE8 302 aa21.28■■□□□ 1
C9orf3-208ENST00000451893 LOC285095A0A1B0GVY8 99 aa21.28■■□□□ 1
C9orf3-208ENST00000451893 B4E171 279 aa21.28■■□□□ 1
C9orf3-208ENST00000451893 STX7O15400 261 aaKnown RBP21.28■■□□□ 1
C9orf3-208ENST00000451893 RPL10P27635 214 aaKnown RBP21.28■■□□□ 1
C9orf3-208ENST00000451893 RBL1P28749 1068 aa21.28■■□□□ 1
C9orf3-208ENST00000451893 AKT1P31749 480 aa21.28■■□□□ 1
C9orf3-208ENST00000451893 TSPAN7P41732 249 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms