RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 TAF8Q7Z7C8 310 aa23.67■■□□□ 1.38
CPSF4-207ENST00000451876 FBF1Q8TES7 1133 aa23.67■■□□□ 1.38
CPSF4-207ENST00000451876 BIRC8Q96P09 236 aa23.67■■□□□ 1.38
CPSF4-207ENST00000451876 TIMM29Q9BSF4 260 aa23.67■■□□□ 1.38
CPSF4-207ENST00000451876 TXLNGYQ9BZA5 131 aa23.67■■□□□ 1.38
CPSF4-207ENST00000451876 KLC4Q9NSK0 619 aa23.67■■□□□ 1.38
CPSF4-207ENST00000451876 BTBD3Q9Y2F9 522 aa23.67■■□□□ 1.38
CPSF4-207ENST00000451876 IQCF5A8MTL0 148 aa23.66■■□□□ 1.38
CPSF4-207ENST00000451876 CXorf49A8MYA2 514 aaPredicted RBP23.66■■□□□ 1.38
CPSF4-207ENST00000451876 LMO7DNF2Z398 122 aa23.66■■□□□ 1.38
CPSF4-207ENST00000451876 YY2O15391 372 aa23.66■■□□□ 1.38
CPSF4-207ENST00000451876 AP2A2O94973 939 aa23.66■■□□□ 1.38
CPSF4-207ENST00000451876 ACTR1BP42025 376 aa23.66■■□□□ 1.38
CPSF4-207ENST00000451876 ACTR1AP61163 376 aa23.66■■□□□ 1.38
CPSF4-207ENST00000451876 SLMAPQ14BN4 828 aa23.66■■□□□ 1.38
CPSF4-207ENST00000451876 CNSTQ6PJW8 725 aa23.66■■□□□ 1.38
CPSF4-207ENST00000451876 XKR5Q6UX68 686 aa23.66■■□□□ 1.38
CPSF4-207ENST00000451876 DBX2Q6ZNG2 339 aa23.66■■□□□ 1.38
CPSF4-207ENST00000451876 ALYREFQ86V81 257 aaKnown RBP23.66■■□□□ 1.38
CPSF4-207ENST00000451876 LKAAEAR1Q8TD35 194 aa23.66■■□□□ 1.38
CPSF4-207ENST00000451876 SCG3Q8WXD2 468 aaKnown RBP23.66■■□□□ 1.38
CPSF4-207ENST00000451876 LINC00615Q96LM1 132 aaPredicted RBP23.66■■□□□ 1.38
CPSF4-207ENST00000451876 GSDMCQ9BYG8 508 aa23.66■■□□□ 1.38
CPSF4-207ENST00000451876 FAM8A1Q9UBU6 413 aa23.66■■□□□ 1.38
CPSF4-207ENST00000451876 PCDHGB2Q9Y5G2 931 aa23.66■■□□□ 1.38
CPSF4-207ENST00000451876 CSNK1G3Q9Y6M4 447 aa23.66■■□□□ 1.38
CPSF4-207ENST00000451876 PRR19A6NJB7 356 aa23.66■■□□□ 1.38
CPSF4-207ENST00000451876 SPAG6O75602 509 aa23.66■■□□□ 1.38
CPSF4-207ENST00000451876 RPS3P23396 243 aaKnown RBP eCLIP23.66■■□□□ 1.38
CPSF4-207ENST00000451876 FMO4P31512 558 aa23.66■■□□□ 1.38
CPSF4-207ENST00000451876 ABCG1P45844 678 aa23.66■■□□□ 1.38
CPSF4-207ENST00000451876 LEPRP48357 1165 aaKnown RBP23.66■■□□□ 1.38
CPSF4-207ENST00000451876 SLC14A1Q13336 389 aa23.66■■□□□ 1.38
CPSF4-207ENST00000451876 CYS1Q717R9 158 aa23.66■■□□□ 1.38
CPSF4-207ENST00000451876 SFTPA2Q8IWL1 248 aa23.66■■□□□ 1.38
CPSF4-207ENST00000451876 PARD6BQ9BYG5 372 aa23.66■■□□□ 1.38
CPSF4-207ENST00000451876 PIEZO1Q92508 2521 aa23.65■■□□□ 1.38
CPSF4-207ENST00000451876 FAM159BA6NKW6 160 aa23.65■■□□□ 1.38
CPSF4-207ENST00000451876 PFDN6O15212 129 aa23.65■■□□□ 1.38
CPSF4-207ENST00000451876 AHSGP02765 367 aa23.65■■□□□ 1.38
CPSF4-207ENST00000451876 OR56A5P0C7T3 313 aa23.65■■□□□ 1.38
CPSF4-207ENST00000451876 ADARP55265 1226 aaKnown RBP23.65■■□□□ 1.38
CPSF4-207ENST00000451876 NFE2L1Q14494 772 aa23.65■■□□□ 1.38
CPSF4-207ENST00000451876 EFTUD2Q15029 972 aaKnown RBP eCLIP23.65■■□□□ 1.383e-13■■■■□ 21.2
CPSF4-207ENST00000451876 KBTBD12Q3ZCT8 623 aa23.65■■□□□ 1.38
CPSF4-207ENST00000451876 ZNF549Q6P9A3 640 aa23.65■■□□□ 1.38
CPSF4-207ENST00000451876 FAM83HQ6ZRV2 1179 aaPredicted RBP23.65■■□□□ 1.38
CPSF4-207ENST00000451876 AMZ2Q86W34 360 aa23.65■■□□□ 1.38
CPSF4-207ENST00000451876 GKN2Q86XP6 184 aa23.65■■□□□ 1.38
CPSF4-207ENST00000451876 KRT222Q8N1A0 295 aa23.65■■□□□ 1.38
CPSF4-207ENST00000451876 LILRA3Q8N6C8 439 aaPredicted RBP23.65■■□□□ 1.38
CPSF4-207ENST00000451876 OSGEPL1Q9H4B0 414 aa23.65■■□□□ 1.38
CPSF4-207ENST00000451876 SPATS2LQ9NUQ6 558 aaKnown RBP23.65■■□□□ 1.38
CPSF4-207ENST00000451876 TAAR2Q9P1P5 351 aa23.65■■□□□ 1.38
CPSF4-207ENST00000451876 VPS9D1Q9Y2B5 631 aa23.65■■□□□ 1.38
CPSF4-207ENST00000451876 CEP250Q9BV73 2442 aa23.65■■□□□ 1.38
CPSF4-207ENST00000451876 COL5A1P20908 1838 aaPredicted RBP23.64■■□□□ 1.38
CPSF4-207ENST00000451876 NEMP2A6NFY4 417 aa23.64■■□□□ 1.38
CPSF4-207ENST00000451876 TRIM38O00635 465 aa23.64■■□□□ 1.38
CPSF4-207ENST00000451876 EML2O95834 649 aa23.64■■□□□ 1.38
CPSF4-207ENST00000451876 ANXA6P08133 673 aa23.64■■□□□ 1.38
CPSF4-207ENST00000451876 ITGB6P18564 788 aa23.64■■□□□ 1.38
CPSF4-207ENST00000451876 STX2P32856 288 aa23.64■■□□□ 1.38
CPSF4-207ENST00000451876 LIMK1P53667 647 aa23.64■■□□□ 1.38
CPSF4-207ENST00000451876 ZNF658BQ4V348 819 aaPredicted RBP23.64■■□□□ 1.38
CPSF4-207ENST00000451876 KIAA0408Q6ZU52 694 aa23.64■■□□□ 1.38
CPSF4-207ENST00000451876 EID2Q8N6I1 236 aa23.64■■□□□ 1.38
CPSF4-207ENST00000451876 OR2L2Q8NH16 312 aa23.64■■□□□ 1.38
CPSF4-207ENST00000451876 GABPB2Q8TAK5 448 aaPredicted RBP23.64■■□□□ 1.38
CPSF4-207ENST00000451876 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.64■■□□□ 1.383e-10■■■■■ 88.3
CPSF4-207ENST00000451876 TBC1D29Q9UFV1 150 aa23.64■■□□□ 1.38
CPSF4-207ENST00000451876 GNPTGQ9UJJ9 305 aa23.64■■□□□ 1.38
CPSF4-207ENST00000451876 DOLKQ9UPQ8 538 aa23.64■■□□□ 1.38
CPSF4-207ENST00000451876 DNMT3AQ9Y6K1 912 aaPredicted RBP23.64■■□□□ 1.38
CPSF4-207ENST00000451876 MGAT4DA6NG13 374 aa23.63■■□□□ 1.37
CPSF4-207ENST00000451876 QSOX1O00391 747 aa23.63■■□□□ 1.37
CPSF4-207ENST00000451876 FLRT2O43155 660 aa23.63■■□□□ 1.37
CPSF4-207ENST00000451876 PMS2P54278 862 aa23.63■■□□□ 1.37
CPSF4-207ENST00000451876 ARHGAP8P85298 464 aa23.63■■□□□ 1.37
CPSF4-207ENST00000451876 DMPKQ09013 629 aa23.63■■□□□ 1.37
CPSF4-207ENST00000451876 PTRHD1Q6GMV3 140 aaKnown RBP23.63■■□□□ 1.37
CPSF4-207ENST00000451876 ZNF449Q6P9G9 518 aa23.63■■□□□ 1.37
CPSF4-207ENST00000451876 NAPRTQ6XQN6 538 aa23.63■■□□□ 1.37
CPSF4-207ENST00000451876 LRRC6Q86X45 466 aa23.63■■□□□ 1.37
CPSF4-207ENST00000451876 SDR16C5Q8N3Y7 309 aa23.63■■□□□ 1.37
CPSF4-207ENST00000451876 FAM46DQ8NEK8 389 aa23.63■■□□□ 1.37
CPSF4-207ENST00000451876 OR4C6Q8NH72 309 aa23.63■■□□□ 1.37
CPSF4-207ENST00000451876 CCM2Q9BSQ5 444 aa23.63■■□□□ 1.37
CPSF4-207ENST00000451876 NLGN3Q9NZ94 848 aa23.63■■□□□ 1.37
CPSF4-207ENST00000451876 PCDHB1Q9Y5F3 818 aa23.63■■□□□ 1.37
CPSF4-207ENST00000451876 GOLGA4Q13439 2230 aaKnown RBP23.63■■□□□ 1.37
CPSF4-207ENST00000451876 NIPSNAP2O75323 286 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 ESR1P03372 595 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 SUZ12Q15022 739 aaKnown RBP23.62■■□□□ 1.37
CPSF4-207ENST00000451876 GALNT7Q86SF2 657 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 CDKL2Q92772 493 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 FAM136AQ96C01 138 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 CAMK1GQ96NX5 476 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 RABGEF1Q9UJ41 708 aa23.62■■□□□ 1.37
CPSF4-207ENST00000451876 TPP1O14773 563 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms