RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 TEX51A0A1B0GUA7 166 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 C5orf60A6NFR6 353 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 OR51F1A6NGY5 319 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 LILRA5A6NI73 299 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 NVLO15381 856 aaKnown RBP9.5□□□□□ -0.89
USP54-207ENST00000451492 ARHGAP6O43182 974 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 PPFIA2O75334 1257 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 RASSF9O75901 435 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 UBXN7O94888 489 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 ETS1P14921 441 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 ITGALP20701 1170 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 LEPRP48357 1165 aaKnown RBP9.5□□□□□ -0.89
USP54-207ENST00000451492 CDKN1CP49918 316 aaPredicted RBP9.5□□□□□ -0.89
USP54-207ENST00000451492 ZNF140P52738 457 aaPredicted RBP9.5□□□□□ -0.89
USP54-207ENST00000451492 TERF1P54274 439 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 EPHA4P54764 986 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 TRA2AQ13595 282 aaKnown RBP eCLIP9.5□□□□□ -0.89
USP54-207ENST00000451492 COL9A2Q14055 689 aaPredicted RBP9.5□□□□□ -0.89
USP54-207ENST00000451492 PLCL1Q15111 1095 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 LONRF2Q1L5Z9 754 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 PARP6Q2NL67 630 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 P3H1Q32P28 736 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 CCDC38Q502W7 563 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 DENND5AQ6IQ26 1287 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 IRGCQ6NXR0 463 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 FAM92BQ6ZTR7 304 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 TMEM26Q6ZUK4 368 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 TAS2R42Q7RTR8 314 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 RNF10Q8N5U6 811 aaKnown RBP9.5□□□□□ -0.89
USP54-207ENST00000451492 DNAAF3Q8N9W5 541 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 OR52K1Q8NGK4 314 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 SLC39A7Q92504 469 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 DCUN1D1Q96GG9 259 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 ELMO2Q96JJ3 720 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 C12orf66Q96MD2 445 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 PPP1R2P1Q96PQ5 205 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 ALS2CR12Q96Q35 445 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 TAAR9Q96RI9 348 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 DPYSL5Q9BPU6 564 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 WWP1Q9H0M0 922 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 LRRC40Q9H9A6 602 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 APMAPQ9HDC9 416 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 POT1Q9NUX5 634 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 OGFRQ9NZT2 677 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 ZNF148Q9UQR1 794 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 PCDHB11Q9Y5F2 797 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 SLC30A1Q9Y6M5 507 aa9.5□□□□□ -0.89
USP54-207ENST00000451492 E7EVH7 732 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 STMND1H3BQB6 276 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 K7ENP7 123 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 CAPN5O15484 640 aaPredicted RBP9.49□□□□□ -0.89
USP54-207ENST00000451492 LDB2O43679 373 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 LIASO43766 372 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 KIF1CO43896 1103 aaKnown RBP9.49□□□□□ -0.89
USP54-207ENST00000451492 POLBP06746 335 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 CCDC175P0C221 793 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 RALBP11234 206 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 XRCC1P18887 633 aaPredicted RBP9.49□□□□□ -0.89
USP54-207ENST00000451492 HADHAP40939 763 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 ARSDP51689 593 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 PPP1CAP62136 330 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 CYP4F2P78329 520 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 XIAPP98170 497 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 PDE1BQ01064 536 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 FOXM1Q08050 763 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 LY6DQ14210 128 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 RPS6KA1Q15418 735 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 CLPPQ16740 277 aaPredicted RBP9.49□□□□□ -0.89
USP54-207ENST00000451492 DCAF12Q5T6F0 453 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 MEI1Q5TIA1 1274 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 KCTD11Q693B1 232 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 INO80CQ6PI98 192 aaPredicted RBP9.49□□□□□ -0.89
USP54-207ENST00000451492 WDR74Q6RFH5 385 aaPredicted RBP9.49□□□□□ -0.89
USP54-207ENST00000451492 PPP1R21Q6ZMI0 780 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 SLC13A5Q86YT5 568 aaPredicted RBP9.49□□□□□ -0.89
USP54-207ENST00000451492 NXPE1Q8N323 547 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 LILRA3Q8N6C8 439 aaPredicted RBP9.49□□□□□ -0.89
USP54-207ENST00000451492 IL22RA1Q8N6P7 574 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 AVL9Q8NBF6 648 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 SLC35B2Q8TB61 432 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 COPS8Q99627 209 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 SMOXQ9NWM0 555 aa9.49□□□□□ -0.89
USP54-207ENST00000451492 MN1Q10571 1320 aaPredicted RBP9.49□□□□□ -0.89
USP54-207ENST00000451492 CACNA1GO43497 2377 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 PRR19A6NJB7 356 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 CFAP99D6REC4 459 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 ATXN7O15265 892 aaPredicted RBP9.48□□□□□ -0.89
USP54-207ENST00000451492 EFSO43281 561 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 ZNF189O75820 626 aaPredicted RBP9.48□□□□□ -0.89
USP54-207ENST00000451492 AP2A1O95782 977 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 SLC35G4P0C7Q5 338 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 ZSCAN5DPP0CG00 497 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 CXCR5P32302 372 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 CAPZBP47756 277 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 ARCN1P48444 511 aaKnown RBP9.48□□□□□ -0.89
USP54-207ENST00000451492 ATP1A2P50993 1020 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 SH3BP2P78314 561 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 CCZ1BP86790 482 aa9.48□□□□□ -0.89
USP54-207ENST00000451492 CCZ1P86791 482 aaPredicted RBP9.48□□□□□ -0.89
USP54-207ENST00000451492 MSLNQ13421 630 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms