RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 BEND7Q8N7W2 519 aaPredicted RBP12.84□□□□□ -0.35
VPS33A-202ENST00000451053 GOLGA6L1Q8N7Z2 621 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 CALML6Q8TD86 181 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 TTC1Q99614 292 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 PPANQ9NQ55 473 aaKnown RBP12.84□□□□□ -0.35
VPS33A-202ENST00000451053 FBXO6Q9NRD1 293 aaPredicted RBP12.84□□□□□ -0.35
VPS33A-202ENST00000451053 TRNAU1APQ9NX07 287 aaKnown RBP12.84□□□□□ -0.35
VPS33A-202ENST00000451053 ZFATQ9P243 1243 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 SLC23A2Q9UGH3 650 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 SLC24A2Q9UI40 661 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 RABGEF1Q9UJ41 708 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 MYO15AQ9UKN7 3530 aa12.84□□□□□ -0.35
VPS33A-202ENST00000451053 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.83□□□□□ -0.36
VPS33A-202ENST00000451053 FAM159BA6NKW6 160 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 RASGRF2O14827 1237 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 KMOO15229 486 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 FFAR2O15552 330 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 PCDHGA12O60330 932 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 PIAS1O75925 651 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 S1PR4O95977 384 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 GIMD1P0DJR0 217 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 ACP5P13686 325 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 ZNF7P17097 686 aaPredicted RBP12.83□□□□□ -0.36
VPS33A-202ENST00000451053 AK4P27144 223 aaPredicted RBP12.83□□□□□ -0.36
VPS33A-202ENST00000451053 PBLDP30039 288 aaPredicted RBP12.83□□□□□ -0.36
VPS33A-202ENST00000451053 PPARGP37231 505 aaPredicted RBP12.83□□□□□ -0.36
VPS33A-202ENST00000451053 NSG1P42857 185 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 PRLHRP49683 370 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 ILF2Q12905 390 aaKnown RBP12.83□□□□□ -0.36
VPS33A-202ENST00000451053 ELOCQ15369 112 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 DEFB133Q30KQ1 61 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 BCL7AQ4VC05 210 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 ALYREFQ86V81 257 aaKnown RBP12.83□□□□□ -0.36
VPS33A-202ENST00000451053 LRRC6Q86X45 466 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 CNTN4Q8IWV2 1026 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 FSTL5Q8N475 847 aaPredicted RBP12.83□□□□□ -0.36
VPS33A-202ENST00000451053 UHMK1Q8TAS1 419 aaKnown RBP12.83□□□□□ -0.36
VPS33A-202ENST00000451053 GPBAR1Q8TDU6 330 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 SCG3Q8WXD2 468 aaKnown RBP12.83□□□□□ -0.36
VPS33A-202ENST00000451053 LPGAT1Q92604 370 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 TCF12Q99081 682 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 P2RY12Q9H244 342 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 SMYD2Q9NRG4 433 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 TXNDC16Q9P2K2 825 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 FBXO5Q9UKT4 447 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 GPR34Q9UPC5 381 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 KCNK6Q9Y257 313 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 BTBD3Q9Y2F9 522 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 NFS1Q9Y697 457 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 DMDP11532 3685 aa12.83□□□□□ -0.36
VPS33A-202ENST00000451053 TDRD6O60522 2096 aaKnown RBP12.82□□□□□ -0.36
VPS33A-202ENST00000451053 UBA6A0AVT1 1052 aaPredicted RBP12.82□□□□□ -0.36
VPS33A-202ENST00000451053 PRMT5O14744 637 aaPredicted RBP12.82□□□□□ -0.36
VPS33A-202ENST00000451053 YY2O15391 372 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 CDH16O75309 829 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 POP7O75817 140 aaKnown RBP12.82□□□□□ -0.36
VPS33A-202ENST00000451053 AP2A2O94973 939 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 C1QAP02745 245 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 SHBGP04278 402 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 INHBAP08476 426 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 MYZAPP0CAP1 466 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 CD59P13987 128 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 RPS3P23396 243 aaKnown RBP eCLIP12.82□□□□□ -0.36
VPS33A-202ENST00000451053 ACTR1BP42025 376 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 MSH2P43246 934 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 ACTR1AP61163 376 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 ZNF844Q08AG5 666 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 ILF3Q12906 894 aaKnown RBP eCLIP12.82□□□□□ -0.36
VPS33A-202ENST00000451053 LRP8Q14114 963 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 RASA2Q15283 850 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 INSCQ1MX18 579 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 KRT71Q3SY84 523 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 KBTBD12Q3ZCT8 623 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 CTSL3PQ5NE16 218 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 CEP85LQ5SZL2 805 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 TEDDM1Q5T9Z0 273 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 RNF187Q5TA31 235 aaPredicted RBP12.82□□□□□ -0.36
VPS33A-202ENST00000451053 SLC30A9Q6PML9 568 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 TAOK1Q7L7X3 1001 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 TAF8Q7Z7C8 310 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 SLC26A11Q86WA9 606 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 TDRPQ86YL5 185 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 CTAGE3PQ8IX95 158 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 C2CD4AQ8NCU7 369 aaPredicted RBP12.82□□□□□ -0.36
VPS33A-202ENST00000451053 LKAAEAR1Q8TD35 194 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 ZNF514Q96K75 400 aaPredicted RBP12.82□□□□□ -0.36
VPS33A-202ENST00000451053 BIRC8Q96P09 236 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 TIMM29Q9BSF4 260 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 GSDMCQ9BYG8 508 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 STMN4Q9H169 189 aaPredicted RBP12.82□□□□□ -0.36
VPS33A-202ENST00000451053 KLC4Q9NSK0 619 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 INTS10Q9NVR2 710 aaKnown RBP12.82□□□□□ -0.36
VPS33A-202ENST00000451053 DNAJC16Q9Y2G8 782 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 CRYL1Q9Y2S2 319 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 PCDHGB2Q9Y5G2 931 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 PSAT1Q9Y617 370 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 CSNK1G3Q9Y6M4 447 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 KNL1Q8NG31 2342 aa12.82□□□□□ -0.36
VPS33A-202ENST00000451053 PRR19A6NJB7 356 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 IQCF5A8MTL0 148 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms