RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 OR6B2Q6IFH4 312 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CYP20A1Q6UW02 462 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 UQCC3Q6UW78 93 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 XKR5Q6UX68 686 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CYP2R1Q6VVX0 501 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CHMP1BQ7LBR1 199 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ZBTB33Q86T24 672 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 FBXO11Q86XK2 927 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 EPHX4Q8IUS5 362 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CDH26Q8IXH8 852 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 LINC00471Q8N535 108 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 OR56A4Q8NGH8 313 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 OR6S1Q8NH40 331 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 NR4A3Q92570 626 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 GAL3ST3Q96A11 431 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ELMO3Q96BJ8 720 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 NGLY1Q96IV0 654 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CNTNAP3BQ96NU0 1288 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SLITRK1Q96PX8 696 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 OR2M2Q96R28 347 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TMEM209Q96SK2 561 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 LGMNQ99538 433 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 PKP2Q99959 881 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TTYH2Q9BSA4 534 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 THUMPD3Q9BV44 507 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 CDADC1Q9BWV3 514 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 RNF32Q9H0A6 362 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SLC38A1Q9H2H9 487 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TRIT1Q9H3H1 467 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 NXF3Q9H4D5 531 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 FAM124BQ9H5Z6 455 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 NTN4Q9HB63 628 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 WASH6PQ9NQA3 447 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 C14orf105Q9NVL8 296 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 UCKL1Q9NWZ5 548 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TAS2R3Q9NYW6 316 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 HSPBP1Q9NZL4 362 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CALML5Q9NZT1 146 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 COL20A1Q9P218 1284 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ERVK-18Q9QC07 812 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 REV1Q9UBZ9 1251 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ADGRE2Q9UHX3 823 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 MGAT4AQ9UM21 535 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TFR2Q9UP52 801 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CLCA2Q9UQC9 943 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 DLGAP4Q9Y2H0 992 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TRPV2Q9Y5S1 764 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 BCL9LQ86UU0 1499 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TNS3Q68CZ2 1445 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 INMT-MINDY4F8WBC2 141 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ATP5J2-PTCD1G3V325 749 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 HOXC11O43248 304 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 SC5DO75845 299 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SLC22A5O76082 557 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 HTR3BO95264 441 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 AHSA1O95433 338 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 LALBAP00709 142 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 F10P00742 488 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 FUCA1P04066 466 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 FABP3P05413 133 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 FABP1P07148 127 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 GNAO1P09471 354 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TFPTP0C1Z6 253 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ITGAMP11215 1152 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 RAB3BP20337 219 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CASP1P29466 404 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 IL6STP40189 918 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 OPRL1P41146 370 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ARCN1P48444 511 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 TOB1P50616 345 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 ZNF81P51508 661 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CLCN5P51795 746 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 BMXP51813 675 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 JAM2P57087 298 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ANTXR2P58335 489 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 BTG1P62324 171 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 BTN3A2P78410 334 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 MC2RQ01718 297 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 PLD1Q13393 1074 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 NAE1Q13564 534 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 KEAP1Q14145 624 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 FASTKD3Q14CZ7 662 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 BMT2Q1RMZ1 405 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 EIF2S3LQ2VIR3 472 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 RC3H1Q5TC82 1133 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 SH3PXD2AQ5TCZ1 1133 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 RAB12Q6IQ22 244 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 RETSATQ6NUM9 610 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 LLGL2Q6P1M3 1020 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 BLOC1S3Q6QNY0 202 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 EPGNQ6UW88 154 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 RTL4Q6ZR62 310 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 VASH1Q7L8A9 365 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 FAM124AQ86V42 546 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 PHACTR4Q8IZ21 702 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 MCOLN2Q8IZK6 566 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CPSF7Q8N684 471 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 INO80EQ8NBZ0 244 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 CAMKVQ8NCB2 501 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 OR6P1Q8NGX9 317 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms