RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 TTPAP49638 278 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 THOC5Q13769 683 aaKnown RBP13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 KIR2DS5Q14953 304 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 HIF1AQ16665 826 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 ANKRD20A4Q4UJ75 823 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 PERM1Q5SV97 790 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 KIAA0930Q6ICG6 404 aaPredicted RBP13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 ZNF449Q6P9G9 518 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 PACS1Q6VY07 963 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 MICALCLQ6ZW33 695 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 TMPRSS12Q86WS5 348 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 SFTPA2Q8IWL1 248 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 TRIM48Q8IWZ4 208 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 BEND7Q8N7W2 519 aaPredicted RBP13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 Q8N9G6 341 aaPredicted RBP13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 OR2L2Q8NH16 312 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 WDR48Q8TAF3 677 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 NAT14Q8WUY8 206 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 PATE1Q8WXA2 126 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 CCDC3Q9BQI4 270 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 CCM2Q9BSQ5 444 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 NAT9Q9BTE0 207 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 DPH5Q9H2P9 285 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 FAM8A1Q9UBU6 413 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 RNF215Q9Y6U7 377 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 CHD8Q9HCK8 2581 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 MYLKQ15746 1914 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 EPG5Q9HCE0 2579 aa13.78□□□□□ -0.2
GTF3C3-206ENST00000448539 CTAGE15A4D2H0 777 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 OPA1O60313 960 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 TTC4O95801 387 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 EML2O95834 649 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 FTH1P02794 183 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 GSTM1P09488 218 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 OR56A5P0C7T3 313 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 CTAGE8P0CG41 777 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 PGAM1P18669 254 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 RPL10P27635 214 aaKnown RBP13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 RPL21P46778 160 aaKnown RBP13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 DRG2P55039 364 aaKnown RBP13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 GSTM4Q03013 218 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 HHEXQ03014 270 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 DHX9Q08211 1270 aaKnown RBP13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 DMPKQ09013 629 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 NFE2L1Q14494 772 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 SMAD1Q15797 465 aaKnown RBP13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 HES3Q5TGS1 186 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 C8orf74Q6P047 294 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 WASH2PQ6VEQ5 465 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 TMEM135Q86UB9 458 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 CTAGE6Q86UF2 777 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 C17orf82Q86X59 251 aaPredicted RBP13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 CCNJLQ8IV13 435 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 CTAGE4Q8IX94 777 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 SFRP1Q8N474 314 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 CLDN19Q8N6F1 224 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 GABPB2Q8TAK5 448 aaPredicted RBP13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 HM13Q8TCT9 377 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 SLC37A2Q8TED4 501 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 SH3KBP1Q96B97 665 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 CXorf40BQ96DE9 158 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 CCDC97Q96F63 343 aaPredicted RBP13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 SIGLEC10Q96LC7 697 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 LINC00615Q96LM1 132 aaPredicted RBP13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 SLC38A3Q99624 504 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 SCNM1Q9BWG6 230 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 TSSK1BQ9BXA7 367 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 WASH6PQ9NQA3 447 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 WHRNQ9P202 907 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 ACSL5Q9ULC5 683 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 WASF3Q9UPY6 502 aa13.77□□□□□ -0.21
GTF3C3-206ENST00000448539 C17orf113A0A1B0GUU1 675 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 A6NCN8 305 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 GOLGA8KD6RF30 607 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 GOLGA8TH3BQL2 631 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 OR1I1O60431 355 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 TOP3BO95985 862 aaKnown RBP13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 MT-CO3P00414 261 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 VIPP01282 170 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 RPLP0P05388 317 aaKnown RBP13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 SLC35G4P0C7Q5 338 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 SPINK2P20155 84 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 ALDH4A1P30038 563 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 GPR3P46089 330 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 FASLGP48023 281 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 INSM1Q01101 510 aaPredicted RBP13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 SPIDRQ14159 915 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 SEMA3AQ14563 771 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 LONRF1Q17RB8 773 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 RNF187Q5TA31 235 aaPredicted RBP13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 AGAP9Q5VTM2 703 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 NEPROQ6NW34 567 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 ABRAXAS1Q6UWZ7 409 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 TMPRSS7Q7RTY8 843 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 LDB1Q86U70 411 aaPredicted RBP13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 CFAP206Q8IYR0 622 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 CALML6Q8TD86 181 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 LRRC39Q96DD0 335 aa13.76□□□□□ -0.21
GTF3C3-206ENST00000448539 FCRL3Q96P31 734 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms