RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 UPK3BL1B0FP48 263 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 UPK3BL2E5RIL1 263 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 HLA-FP30511 346 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 SLC26A3P40879 764 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 NTHL1P78549 312 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 CBX2Q14781 532 aaPredicted RBP14.61□□□□□ -0.07
SF1-211ENST00000448404 SBSNQ6UWP8 590 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 TMEM25Q86YD3 366 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 FIBCD1Q8N539 461 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 KLHL23Q8NBE8 558 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 HJURPQ8NCD3 748 aaPredicted RBP14.61□□□□□ -0.07
SF1-211ENST00000448404 CHST14Q8NCH0 376 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 TMEM181Q9P2C4 612 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 CD300AQ9UGN4 299 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 ARIH1Q9Y4X5 557 aaPredicted RBP14.61□□□□□ -0.07
SF1-211ENST00000448404 A0A1W2PQ67 120 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 PRMT5O14744 637 aaPredicted RBP14.61□□□□□ -0.07
SF1-211ENST00000448404 CASQ2O14958 399 aaPredicted RBP14.61□□□□□ -0.07
SF1-211ENST00000448404 HMGCLP35914 325 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 ZFP36L2P47974 494 aaKnown RBP14.61□□□□□ -0.07
SF1-211ENST00000448404 BCL2L1Q07817 233 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 RAB33AQ14088 237 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 ABRAXAS2Q15018 415 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 SFRP1Q8N474 314 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 RNF175Q8N4F7 328 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 OR4F6Q8NGB9 312 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 METTL6Q8TCB7 284 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 SKA2Q8WVK7 121 aaPredicted RBP14.61□□□□□ -0.07
SF1-211ENST00000448404 VOPP1Q96AW1 172 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 EGFL8Q99944 293 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 ZFP14Q9HCL3 533 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 CHCHD3Q9NX63 227 aaKnown RBP14.61□□□□□ -0.07
SF1-211ENST00000448404 GPR45Q9Y5Y3 372 aa14.61□□□□□ -0.07
SF1-211ENST00000448404 HIDE1A8MVS5 230 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 SYNCRIPO60506 623 aaKnown RBP14.6□□□□□ -0.07
SF1-211ENST00000448404 CLIC3O95833 236 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 CYBBP04839 570 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 FGF4P08620 206 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 SLC6A2P23975 617 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 GALNT1Q10472 559 aaPredicted RBP14.6□□□□□ -0.07
SF1-211ENST00000448404 DYNC1I2Q13409 638 aaKnown RBP14.6□□□□□ -0.07
SF1-211ENST00000448404 SELPLGQ14242 412 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 PTGR1Q14914 329 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 RFTN2Q52LD8 501 aaPredicted RBP14.6□□□□□ -0.07
SF1-211ENST00000448404 Q6ZNB5 142 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 GPRIN3Q6ZVF9 776 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 PYCR2Q96C36 320 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 PPM1MQ96MI6 270 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 P2RY12Q9H244 342 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 SOX17Q9H6I2 414 aaPredicted RBP14.6□□□□□ -0.07
SF1-211ENST00000448404 ZDHHC6Q9H6R6 413 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 LATS2Q9NRM7 1088 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 COMMD8Q9NX08 183 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 SPG21Q9NZD8 308 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 CNOT6Q9ULM6 557 aaKnown RBP14.6□□□□□ -0.07
SF1-211ENST00000448404 NDUFAF1Q9Y375 327 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 TRIM43BA6NCK2 446 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 OR7A17O14581 309 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 SLC22A2O15244 555 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 AKAP10O43572 662 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 ESRRBO95718 433 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 UGT2B4P06133 528 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 G6PDP11413 515 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 ADSLP30566 484 aaPredicted RBP14.6□□□□□ -0.07
SF1-211ENST00000448404 NFATC2Q13469 925 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 RFTN1Q14699 578 aaPredicted RBP14.6□□□□□ -0.07
SF1-211ENST00000448404 MAP7D1Q3KQU3 841 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 RARS2Q5T160 578 aaKnown RBP14.6□□□□□ -0.07
SF1-211ENST00000448404 UGT2A3Q6UWM9 527 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 Q6ZVU0 165 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 GOLGA7Q7Z5G4 137 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 LMNTD1Q8N9Z9 388 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 TRIM43Q96BQ3 446 aaPredicted RBP14.6□□□□□ -0.07
SF1-211ENST00000448404 CLPBQ9H078 707 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 CRLS1Q9UJA2 301 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 TBX21Q9UL17 535 aa14.6□□□□□ -0.07
SF1-211ENST00000448404 GOLGA4Q13439 2230 aaKnown RBP14.6□□□□□ -0.07
SF1-211ENST00000448404 ANTXRLA6NF34 631 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 TAPBPO15533 448 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 LHCGRP22888 699 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 WDR5P61964 334 aaKnown RBP14.59□□□□□ -0.07
SF1-211ENST00000448404 NFYCQ13952 458 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 LRRC26Q2I0M4 334 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 KIAA2013Q8IYS2 634 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 NKAPQ8N5F7 415 aaKnown RBP14.59□□□□□ -0.07
SF1-211ENST00000448404 BEND7Q8N7W2 519 aaPredicted RBP14.59□□□□□ -0.07
SF1-211ENST00000448404 PEX13Q92968 403 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 PAWRQ96IZ0 340 aaKnown RBP14.59□□□□□ -0.07
SF1-211ENST00000448404 SDR39U1Q9NRG7 319 aaPredicted RBP14.59□□□□□ -0.07
SF1-211ENST00000448404 OGDHLQ9ULD0 1010 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 NEDD8-MDP1E9PL57 170 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 SH3BGRLO75368 114 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 FGF18O76093 207 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 TRBC1P01850 177 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 C1QCP02747 245 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 C8AP07357 584 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 MTPNP58546 118 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 ATP6V0D1P61421 351 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 CACNG1Q06432 222 aa14.59□□□□□ -0.07
SF1-211ENST00000448404 PLEKHG6Q3KR16 790 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms