RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 CXorf21Q9HAI6 301 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 AASDHPPTQ9NRN7 309 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 RAB26Q9ULW5 256 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 DUSP12Q9UNI6 340 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 SIT1Q9Y3P8 196 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 MYO10Q9HD67 2058 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 OTOL1A6NHN0 477 aaPredicted RBP5.89□□□□□ -1.47
PROM1-201ENST00000447510 PRRT4C9JH25 899 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 KPNA4O00629 521 aaPredicted RBP5.89□□□□□ -1.47
PROM1-201ENST00000447510 STX7O15400 261 aaKnown RBP5.89□□□□□ -1.47
PROM1-201ENST00000447510 SMAD6O43541 496 aaKnown RBP5.89□□□□□ -1.47
PROM1-201ENST00000447510 AKAP10O43572 662 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 MFN2O95140 757 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 CLIC3O95833 236 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 BCL10O95999 233 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 MT-CYBP00156 380 aaPredicted RBP5.89□□□□□ -1.47
PROM1-201ENST00000447510 TPH1P17752 444 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 CTPS1P17812 591 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 HOXC13P31276 330 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 GKP32189 559 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 OPRD1P41143 372 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 GPX6P59796 221 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 OCA2Q04671 838 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 CDK18Q07002 472 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 WASHC5Q12768 1159 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 GRM3Q14832 879 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 ZNF829Q3KNS6 432 aaPredicted RBP5.89□□□□□ -1.47
PROM1-201ENST00000447510 MSS51Q4VC12 460 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 INO80DQ53TQ3 878 aaPredicted RBP5.89□□□□□ -1.47
PROM1-201ENST00000447510 FNBP1LQ5T0N5 605 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 DEPDC1Q5TB30 811 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 TXNDC11Q6PKC3 985 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 LAYNQ6UX15 382 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.89□□□□□ -1.47
PROM1-201ENST00000447510 DPY19L3Q6ZPD9 716 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 PPIL6Q8IXY8 311 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 ATXN7L3BQ96GX2 97 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 MAELQ96JY0 434 aaKnown RBP5.89□□□□□ -1.47
PROM1-201ENST00000447510 TSGA13Q96PP4 275 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 RBM38Q9H0Z9 239 aaKnown RBP5.89□□□□□ -1.47
PROM1-201ENST00000447510 EPS8L2Q9H6S3 715 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 TRIM39Q9HCM9 518 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 POLE4Q9NR33 117 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 PNPOQ9NVS9 261 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 WNT16Q9UBV4 365 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 AURKCQ9UQB9 309 aa5.89□□□□□ -1.47
PROM1-201ENST00000447510 MYO16Q9Y6X6 1858 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 KRBA1A5PL33 1030 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 STX16-NPEPL1H3BU86 382 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 NDUFS2O75306 463 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 AVILO75366 819 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 H6PDO95479 791 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 PIRTP0C851 137 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 GLULP15104 373 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 XRCC1P18887 633 aaPredicted RBP5.88□□□□□ -1.47
PROM1-201ENST00000447510 NR4A2P43354 598 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 TNFRSF4P43489 277 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 BMXP51813 675 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 GDF10P55107 478 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 KLF1Q13351 362 aaPredicted RBP5.88□□□□□ -1.47
PROM1-201ENST00000447510 MTX3Q5HYI7 312 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 AARS2Q5JTZ9 985 aaKnown RBP5.88□□□□□ -1.47
PROM1-201ENST00000447510 ASTLQ6HA08 431 aaPredicted RBP5.88□□□□□ -1.47
PROM1-201ENST00000447510 NIPAL1Q6NVV3 410 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 KYAT3Q6YP21 454 aaKnown RBP5.88□□□□□ -1.47
PROM1-201ENST00000447510 SNX32Q86XE0 403 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 PHTF2Q8N3S3 785 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 SLC15A4Q8N697 577 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.88□□□□□ -1.47
PROM1-201ENST00000447510 C12orf50Q8NA57 414 aaPredicted RBP5.88□□□□□ -1.47
PROM1-201ENST00000447510 PPHLN1Q8NEY8 458 aaKnown RBP5.88□□□□□ -1.47
PROM1-201ENST00000447510 OR14C36Q8NHC7 312 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 SUN5Q8TC36 379 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 HTRA1Q92743 480 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.88□□□□□ -1.47
PROM1-201ENST00000447510 MYO19Q96H55 970 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 ACOX2Q99424 681 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 TBL1YQ9BQ87 522 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 MLPHQ9BV36 600 aaPredicted RBP5.88□□□□□ -1.47
PROM1-201ENST00000447510 COQ10BQ9H8M1 238 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 IL36AQ9UHA7 158 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 SHOC2Q9UQ13 582 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 N6AMT1Q9Y5N5 214 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 TBC1D3DA0A087WVF3 549 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 TBC1D3IA0A087WXS9 549 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 TBC1D3EA0A087X179 549 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 TBC1D3KA0A087X1G2 549 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 TCRBV21S2A2A0A5A6 115 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 TBC1D3FA6NER0 549 aaPredicted RBP5.88□□□□□ -1.47
PROM1-201ENST00000447510 CAPN14A8MX76 684 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 TBC1D3LB9A6J9 549 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 FAM47E-STBD1D6RA91 191 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 NPC1O15118 1278 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 ALOX15BO15296 676 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 ATE1O95260 518 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 TBC1D3HP0C7X1 549 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 ZNF23P17027 643 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 CKMT2P17540 419 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 ITGAXP20702 1163 aa5.88□□□□□ -1.47
PROM1-201ENST00000447510 YAP1P46937 504 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms