RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 BATF3Q9NR55 127 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 SPATS2LQ9NUQ6 558 aaKnown RBP9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 ZDHHC3Q9NYG2 299 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 PKD2L2Q9NZM6 624 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 MARK1Q9P0L2 795 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 WASF2Q9Y6W5 498 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 DENND4CQ5VZ89 1909 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 PDE4DIPQ5VU43 2346 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 A0A1W2PQ67 120 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 RAD51BO15315 384 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 TULP3O75386 442 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 KATNA1O75449 491 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 OR4F21O95013 312 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 ADH1CP00326 375 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 CTSLP07711 333 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 CYP2A6P11509 494 aaPredicted RBP9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 HGFP14210 728 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 ETV3P41162 512 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 HSPA7P48741 367 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 PTPN5P54829 565 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 PKNOX1P55347 436 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 SLC34A1Q06495 639 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 MESP2Q0VG99 397 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 BIRC2Q13490 618 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 RPS6KA2Q15349 733 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 GPRC6AQ5T6X5 926 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 PGM2L1Q6PCE3 622 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 SBSNQ6UWP8 590 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 Q6ZVL8 140 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 GET4Q7L5D6 327 aaPredicted RBP9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 HSD11B1LQ7Z5J1 315 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 KIAA0907Q7Z7F0 614 aaPredicted RBP9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 ADAMTSL2Q86TH1 951 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 CDYL2Q8N8U2 506 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 OR52B6Q8NGF0 335 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 OR9I1Q8NGQ6 314 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 SLC26A7Q8TE54 656 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 PDLIM5Q96HC4 596 aaKnown RBP9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 ACOX2Q99424 681 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 FAM126AQ9BYI3 521 aaPredicted RBP9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 NSUN3Q9H649 340 aaKnown RBP9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 WDR41Q9HAD4 459 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 PCDH12Q9NPG4 1184 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 NUDT4Q9NZJ9 180 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 STOML1Q9UBI4 398 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 FAM8A1Q9UBU6 413 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 ZMYM5Q9UJ78 669 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 YBX2Q9Y2T7 364 aaKnown RBP9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 C15orf41Q9Y2V0 281 aa9.39□□□□□ -0.91
COL6A4P1-201ENST00000446690 OTOL1A6NHN0 477 aaPredicted RBP9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 WASH3PC4AMC7 463 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 CCNT2O60583 730 aaKnown RBP9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 ESRRBO95718 433 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 CHEK2O96017 543 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 ALDOCP09972 364 aaKnown RBP9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 CISD3P0C7P0 127 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 TIMP2P16035 220 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 GCKP35557 465 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 GDF5P43026 501 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 B4GALNT1Q00973 533 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 CREB5Q02930 508 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 HSPA14Q0VDF9 509 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 HERC3Q15034 1050 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 TTLL9Q3SXZ7 439 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 RARS2Q5T160 578 aaKnown RBP9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 LAYNQ6UX15 382 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 GPRIN3Q6ZVF9 776 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 RNF217Q8TC41 542 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 BPIFB1Q8TDL5 484 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 PYDC1Q8WXC3 89 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 DCUN1D1Q96GG9 259 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 C19orf43Q9BQ61 176 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 FAM83DQ9H4H8 585 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 POLG2Q9UHN1 485 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 MBD1Q9UIS9 605 aaPredicted RBP9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 ZNF225Q9UK10 706 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 TMCO1Q9UM00 188 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 POMPQ9Y244 141 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 EME2A4GXA9 379 aaPredicted RBP9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 C9JVG2 144 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 KPNA3O00505 521 aaPredicted RBP9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 SNRPB2P08579 225 aaKnown RBP9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 OR56A5P0C7T3 313 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 UROSP10746 265 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 HLA-EP13747 358 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 TCF3P15923 654 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 TCN1P20061 433 aaPredicted RBP9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 FSHRP23945 695 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 VIPR1P32241 457 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 CCR7P32248 378 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 ATXN3P54252 364 aaPredicted RBP9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 MTTPP55157 894 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 ERVPABLB-1P60509 514 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 ERVK-21P61565 698 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 AP2B1P63010 937 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 STX5Q13190 355 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 MAPRE2Q15555 327 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 PHKG1Q16816 387 aa9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 ZNF648Q5T619 568 aaPredicted RBP9.38□□□□□ -0.91
COL6A4P1-201ENST00000446690 ZDHHC20Q5W0Z9 365 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms