RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ABCB8Q9NUT2 735 aa4.42□□□□□ -1.7
HMGB1P48-201ENST00000446155 OLAHQ9NV23 265 aa4.42□□□□□ -1.7
HMGB1P48-201ENST00000446155 HIF1ANQ9NWT6 349 aa4.42□□□□□ -1.7
HMGB1P48-201ENST00000446155 OR6C3Q9NZP0 311 aa4.42□□□□□ -1.7
HMGB1P48-201ENST00000446155 CWC15Q9P013 229 aaKnown RBP4.42□□□□□ -1.7
HMGB1P48-201ENST00000446155 AKAP7Q9P0M2 348 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P48-201ENST00000446155 KCNK7Q9Y2U2 307 aa4.42□□□□□ -1.7
HMGB1P48-201ENST00000446155 A0A1W2PRV1 198 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 HTR3EA5X5Y0 456 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 ANXA2P2A6NMY6 339 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 MAGEB17A8MXT2 336 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 H3BQ06 376 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 INSIG1O15503 277 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 SMAD6O43541 496 aaKnown RBP4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 ITM2AO43736 263 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 DAB1O75553 588 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 VNN2O95498 520 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 OLFM2O95897 454 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 ALPLP05186 524 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 PCP11498 1178 aaKnown RBP4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 GAP43P17677 238 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 PIGAP37287 484 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 THBS3P49746 956 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 ARSEP51690 589 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 YBEYP58557 167 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 BNC1Q01954 994 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 CRYZQ08257 329 aaKnown RBP4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 GRSF1Q12849 480 aaKnown RBP eCLIP4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 TRAF3Q13114 568 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 HNRNPA0Q13151 305 aaKnown RBP4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 RPA4Q13156 261 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 PTPN14Q15678 1187 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 DLG2Q15700 870 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 ANKRD20A4Q4UJ75 823 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 ANKRD20A8PQ5CZ79 823 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 ANKRD20A2Q5SQ80 823 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 ANKRD20A1Q5TYW2 823 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 FAM69BQ5VUD6 431 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 ANKRD20A3Q5VUR7 823 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 CENPVQ7Z7K6 275 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 TSPAN33Q86UF1 283 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 HOOK3Q86VS8 718 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 CLIP4Q8N3C7 705 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 ATAD1Q8NBU5 361 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 RBM15BQ8NDT2 890 aaKnown RBP4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 BEST2Q8NFU1 509 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 OR10S1Q8NGN2 331 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 OR14L1PQ8NHC6 308 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 SPATA20Q8TB22 786 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 SEPT1Q8WYJ6 367 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 PHF21BQ96EK2 531 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 RRNAD1Q96FB5 475 aaKnown RBP4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 PDLIM5Q96HC4 596 aaKnown RBP4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 INTS14Q96SY0 518 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 RTN4RQ9BZR6 473 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 TNMDQ9H2S6 317 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 SLC28A3Q9HAS3 691 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 MKKSQ9NPJ1 570 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 HPF1Q9NWY4 346 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 CISD1Q9NZ45 108 aaKnown RBP4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 DDX25Q9UHL0 483 aaKnown RBP4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 MYO6Q9UM54 1294 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 CEPT1Q9Y6K0 416 aa4.41□□□□□ -1.7
HMGB1P48-201ENST00000446155 CPED1A4D0V7 1026 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 PGRMC2O15173 223 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 HSPA12AO43301 675 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 SEC22BO75396 215 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 JRKO75564 520 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 CELF2O95319 508 aaKnown RBP4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 GCNT3O95395 438 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 GLUD1P00367 558 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 HIST1H2ABP04908 130 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 ZFYP08048 801 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 PDGFRAP16234 1089 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 HIST1H2ADP20671 130 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 ACHEP22303 614 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 GPTP24298 496 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 PTPN3P26045 913 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 HSPA4P34932 840 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 GLUD2P49448 558 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 EGR4Q05215 589 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 CBX3Q13185 183 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 PPIGQ13427 754 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 EFNB3Q15768 340 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 C2orf68Q2NKX9 166 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 KRT39Q6A163 491 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 DHRS7BQ6IAN0 325 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 TMEM211Q6ICI0 200 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 WDR73Q6P4I2 378 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 FBXO46Q6PJ61 603 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 HIST3H2AQ7L7L0 130 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 HAPLN4Q86UW8 402 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 SAMD14Q8IZD0 417 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 HUS1BQ8NHY5 278 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 TRPC4APQ8TEL6 797 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 TAF4BQ92750 862 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 SLC41A2Q96JW4 573 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 PPP1R13BQ96KQ4 1090 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 FAM110AQ9BQ89 295 aa4.4□□□□□ -1.71
HMGB1P48-201ENST00000446155 WACQ9BTA9 647 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms