RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 A0A087WXM4 84 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 CPED1A4D0V7 1026 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 DNAJA2O60884 412 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 ZCCHC18P0CG32 403 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 MPIP34949 423 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 KIR3DL1P43629 444 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 CBX5P45973 191 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 GCNT6Q5T4J0 391 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 NET1Q7Z628 596 aaPredicted RBP11.11□□□□□ -0.63
FN1-211ENST00000443816 MMAAQ8IVH4 418 aaKnown RBP11.11□□□□□ -0.63
FN1-211ENST00000443816 POF1BQ8WVV4 589 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 CKAP2Q8WWK9 683 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 BAP1Q92560 729 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 TMEM125Q96AQ2 219 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 FAM153BP0C7A2 387 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 FGFR3P22607 806 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 PKNOX1P55347 436 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 ZSWIM7Q19AV6 140 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 RSBN1Q5VWQ0 802 aaPredicted RBP11.11□□□□□ -0.63
FN1-211ENST00000443816 MBLAC2Q68D91 279 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 MZT2BQ6NZ67 158 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 PTCHD4Q6ZW05 846 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 PSMG2Q969U7 264 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 KIAA1143Q96AT1 154 aaPredicted RBP11.11□□□□□ -0.63
FN1-211ENST00000443816 ARHGAP39Q9C0H5 1083 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 DPEP3Q9H4B8 488 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 SUV39H2Q9H5I1 410 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 ACSS3Q9H6R3 686 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 SFXN1Q9H9B4 322 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 DNAAF2Q9NVR5 837 aaKnown RBP11.11□□□□□ -0.63
FN1-211ENST00000443816 AKAP11Q9UKA4 1901 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 KIF1CO43896 1103 aaKnown RBP11.11□□□□□ -0.63
FN1-211ENST00000443816 KERAO60938 352 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 FAM163BP0C2L3 166 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 USP46P62068 366 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 SPATA6LQ8N4H0 392 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 RNF148Q8N7C7 305 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 CYB5D2Q8WUJ1 264 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 ZNF599Q96NL3 588 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 DSN1Q9H410 356 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 ANKZF1Q9H8Y5 726 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 SLC24A3Q9HC58 644 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 FBXW2Q9UKT8 454 aa11.11□□□□□ -0.63
FN1-211ENST00000443816 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.11□□□□□ -0.63
FN1-211ENST00000443816 NUP205Q92621 2012 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 B4DGG1 531 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 NFKBIEO00221 500 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 HNRNPLP14866 589 aaKnown RBP eCLIP11.1□□□□□ -0.635e-8■■□□□ 12.5
FN1-211ENST00000443816 ARHGDIBP52566 201 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 GRASPQ7Z6J2 395 aaPredicted RBP11.1□□□□□ -0.63
FN1-211ENST00000443816 LRRTM4Q86VH4 590 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 PLD5Q8N7P1 536 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 JOSD2Q8TAC2 188 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 ZCCHC10Q8TBK6 192 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 MUC13Q9H3R2 512 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 TDP1Q9NUW8 608 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 PCDHGA11Q9Y5H2 935 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 PDE5AO76074 875 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 COX4I1P13073 169 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 ZNF37AP17032 561 aaPredicted RBP11.1□□□□□ -0.63
FN1-211ENST00000443816 PGDP52209 483 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 RFX4Q33E94 735 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 ARMC3Q5W041 872 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 LIN54Q6MZP7 749 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 RINLQ6ZS11 566 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 GPR21Q99679 349 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 NTPCRQ9BSD7 190 aaKnown RBP11.1□□□□□ -0.63
FN1-211ENST00000443816 CCM2Q9BSQ5 444 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 CARS2Q9HA77 564 aaKnown RBP11.1□□□□□ -0.63
FN1-211ENST00000443816 CRTAC1Q9NQ79 661 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 SERINC1Q9NRX5 453 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 ADGRE2Q9UHX3 823 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 SATB2Q9UPW6 733 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 LOC100506127A0A0U1RQW1 187 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 ESR1P03372 595 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 TRIM25Q14258 630 aaKnown RBP11.1□□□□□ -0.63
FN1-211ENST00000443816 PDK4Q16654 411 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 SMU1Q2TAY7 513 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 PCDH20Q8N6Y1 951 aaKnown RBP11.1□□□□□ -0.63
FN1-211ENST00000443816 AENQ8WTP8 325 aaKnown RBP11.1□□□□□ -0.63
FN1-211ENST00000443816 EXOSC8Q96B26 276 aaKnown RBP11.1□□□□□ -0.63
FN1-211ENST00000443816 TDRD1Q9BXT4 1180 aaKnown RBP11.1□□□□□ -0.63
FN1-211ENST00000443816 TOR4AQ9NXH8 423 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 COMMD9Q9P000 198 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 PCDHGC4Q9Y5F7 938 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 A0A0U1RQF3 1178 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 LMO2P25791 158 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 RGS8P57771 180 aaPredicted RBP11.1□□□□□ -0.63
FN1-211ENST00000443816 SPIRE1Q08AE8 756 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 ARHGAP36Q6ZRI8 547 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 TAC4Q86UU9 113 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 COX18Q8N8Q8 333 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 FAM81AQ8TBF8 368 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 PLEKHA1Q9HB21 404 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 C19orf25Q9UFG5 118 aaPredicted RBP11.1□□□□□ -0.63
FN1-211ENST00000443816 OGDHLQ9ULD0 1010 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 PLCH1Q4KWH8 1693 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 SIN3BO75182 1162 aa11.1□□□□□ -0.63
FN1-211ENST00000443816 MT-CYBP00156 380 aaPredicted RBP11.1□□□□□ -0.63
FN1-211ENST00000443816 GOT2P00505 430 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms