RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 TBC1D3FA6NER0 549 aaPredicted RBP10.46□□□□□ -0.74
CALD1-210ENST00000443197 ENO4A6NNW6 628 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 TBC1D3LB9A6J9 549 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 TRIM38O00635 465 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 LEFTY1O75610 366 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 TBC1D3HP0C7X1 549 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 HOXD9P28356 352 aaPredicted RBP10.46□□□□□ -0.74
CALD1-210ENST00000443197 BMPR1AP36894 532 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 INO80DQ53TQ3 878 aaPredicted RBP10.46□□□□□ -0.74
CALD1-210ENST00000443197 ATAT1Q5SQI0 421 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 TBC1D3GQ6DHY5 549 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 TBC1D3CQ6IPX1 549 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 TPRG1Q6ZUI0 275 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 GAREM2Q75VX8 874 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 ANKRD46Q86W74 232 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 TBC1D3Q8IZP1 549 aaPredicted RBP10.46□□□□□ -0.74
CALD1-210ENST00000443197 CHST14Q8NCH0 376 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 PRICKLE1Q96MT3 831 aaPredicted RBP10.46□□□□□ -0.74
CALD1-210ENST00000443197 MIPEPQ99797 713 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 TRIM8Q9BZR9 551 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 RMND5AQ9H871 391 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 MRM3Q9HC36 420 aaKnown RBP10.46□□□□□ -0.74
CALD1-210ENST00000443197 CAPN10Q9HC96 672 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 SPHK2Q9NRA0 654 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 SLC13A4Q9UKG4 626 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 SNX6Q9UNH7 406 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 INVSQ9Y283 1065 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 COQ6Q9Y2Z9 468 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 PRKAB1Q9Y478 270 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 PPP6CO00743 305 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 KERAO60938 352 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 OAS1P00973 400 aaKnown RBP10.46□□□□□ -0.74
CALD1-210ENST00000443197 T-ENOLP0DO92 83 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 ADH5P11766 374 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 NELFEP18615 380 aaKnown RBP10.46□□□□□ -0.74
CALD1-210ENST00000443197 EN2P19622 333 aaPredicted RBP10.46□□□□□ -0.74
CALD1-210ENST00000443197 MRPS35P82673 323 aaKnown RBP10.46□□□□□ -0.74
CALD1-210ENST00000443197 VAC14Q08AM6 782 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 PLCL1Q15111 1095 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 TGFBIQ15582 683 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.46□□□□□ -0.74
CALD1-210ENST00000443197 ZNF786Q8N393 782 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 LPGAT1Q92604 370 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 MGME1Q9BQP7 344 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 OR2AG1Q9H205 316 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 KCNK13Q9HB14 408 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 TTC34A8MYJ7 566 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 AGRPO00253 132 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 FGF19O95750 216 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 CHRM1P11229 460 aaPredicted RBP10.45□□□□□ -0.74
CALD1-210ENST00000443197 COX7A2P14406 83 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 CALRP27797 417 aaKnown RBP10.45□□□□□ -0.74
CALD1-210ENST00000443197 HK2P52789 917 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 ARF5P84085 180 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 COL9A2Q14055 689 aaPredicted RBP10.45□□□□□ -0.74
CALD1-210ENST00000443197 OR4D1Q15615 310 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 SPPL2CQ8IUH8 684 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 TRIM48Q8IWZ4 208 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 PPP3R2Q96LZ3 170 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 MTERF1Q99551 399 aaKnown RBP10.45□□□□□ -0.74
CALD1-210ENST00000443197 MIEF1Q9NQG6 463 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 CXXC1Q9P0U4 656 aaPredicted RBP10.45□□□□□ -0.74
CALD1-210ENST00000443197 CCL26Q9Y258 94 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 LRCH1Q9Y2L9 728 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 LCHNA4D1U4 455 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 FAM149AA5PLN7 773 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 CAPN8A6NHC0 703 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 CD1DP15813 335 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 HMGA1P17096 107 aaKnown RBP10.45□□□□□ -0.74
CALD1-210ENST00000443197 PSMC3P17980 439 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 ITGAXP20702 1163 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 FASP25445 335 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 MAPK1P28482 360 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 NEK2P51955 445 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 THOP1P52888 689 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 PHEXP78562 749 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 NFATC2Q13469 925 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 ZNF678Q5SXM1 525 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 MBOAT1Q6ZNC8 495 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 BHLHA9Q7RTU4 235 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 ISCA2Q86U28 154 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 OR52E6Q96RD3 313 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 HERC2P3Q9BVR0 1158 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 MKS1Q9NXB0 559 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 LEF1Q9UJU2 399 aaPredicted RBP10.45□□□□□ -0.74
CALD1-210ENST00000443197 OGDHLQ9ULD0 1010 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 CLCA2Q9UQC9 943 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 GPSM3Q9Y4H4 160 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 WASH4PA8MWX3 477 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 C5orf58C9J3I9 102 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 SNNO75324 88 aaPredicted RBP10.45□□□□□ -0.74
CALD1-210ENST00000443197 TIPRLO75663 272 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 PRNPP04156 253 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 PCCBP05166 539 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 UROSP10746 265 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 GPC1P35052 558 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 ETV3P41162 512 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 CYP4F2P78329 520 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 DLG1Q12959 904 aa10.45□□□□□ -0.74
CALD1-210ENST00000443197 MAD2L1Q13257 205 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms