RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 KIAA0391O15091 583 aaKnown RBP6.93□□□□□ -1.3
SSXP3-201ENST00000442971 GPRIN2O60269 458 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 SNX2O60749 519 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 ZMPSTE24O75844 475 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 USP1O94782 785 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 KRT18P05783 430 aaKnown RBP6.93□□□□□ -1.3
SSXP3-201ENST00000442971 PEPDP12955 493 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 F3P13726 295 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 PAX1P15863 534 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 MMP12P39900 470 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 CDK3Q00526 305 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 INCA1Q0VD86 236 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 KRT32Q14532 448 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 SGSM1Q2NKQ1 1148 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 HYIQ5T013 277 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 TMTC4Q5T4D3 741 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 ABHD17BQ5VST6 288 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 ERAP2Q6P179 960 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 DOK6Q6PKX4 331 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 SCML4Q8N228 414 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 LZTR1Q8N653 840 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 SIRT6Q8N6T7 355 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 C4orf32Q8N8J7 132 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 ATP6V0D2Q8N8Y2 350 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 OR2AP1Q8NGE2 309 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 OR5M3Q8NGP4 307 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 LINC01560Q8TB33 94 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 CCDC110Q8TBZ0 833 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 SMPDL3BQ92485 455 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 FAM149B1Q96BN6 582 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 FRMD6Q96NE9 622 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 PLEKHG4BQ96PX9 1271 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 FANCEQ9HB96 536 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 CNGB3Q9NQW8 809 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 Q9UFV3 132 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 GNPTGQ9UJJ9 305 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 ACTL7AQ9Y615 435 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 HS3ST3B1Q9Y662 390 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 TENM2Q9NT68 2774 aa6.93□□□□□ -1.3
SSXP3-201ENST00000442971 CFAP69A5D8W1 941 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 FAM157AC9JC47 383 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 PIN1P1O15428 100 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 GSRP00390 522 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 PTGER1P34995 402 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 ASPAP45381 313 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 CDH4P55283 916 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 ATP5J2P56134 94 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 SNRPD1P62314 119 aaKnown RBP6.92□□□□□ -1.3
SSXP3-201ENST00000442971 ARF5P84085 180 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 NCOA4Q13772 614 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 OCLNQ16625 522 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 UGP2Q16851 508 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 ZNF789Q5FWF6 425 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 FAM102AQ5T9C2 384 aaPredicted RBP6.92□□□□□ -1.3
SSXP3-201ENST00000442971 HIBCHQ6NVY1 386 aaPredicted RBP6.92□□□□□ -1.3
SSXP3-201ENST00000442971 MRPL14Q6P1L8 145 aaKnown RBP6.92□□□□□ -1.3
SSXP3-201ENST00000442971 FAM20CQ8IXL6 584 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 DIS3L2Q8IYB7 885 aaKnown RBP6.92□□□□□ -1.3
SSXP3-201ENST00000442971 ANKRD52Q8NB46 1076 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 NUP43Q8NFH3 380 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 OR7D4Q8NG98 312 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 OR1L3Q8NH93 324 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 BRIX1Q8TDN6 353 aaKnown RBP6.92□□□□□ -1.3
SSXP3-201ENST00000442971 RNASE6Q93091 150 aaKnown RBP6.92□□□□□ -1.3
SSXP3-201ENST00000442971 LRRC46Q96FV0 321 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 SH3GL2Q99962 352 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 SPON2Q9BUD6 331 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 ZNF747Q9BV97 191 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 ZFATQ9P243 1243 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 IFT80Q9P2H3 777 aaPredicted RBP6.92□□□□□ -1.3
SSXP3-201ENST00000442971 SLC12A6Q9UHW9 1150 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 VANGL2Q9ULK5 521 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 CDYLQ9Y232 598 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 PCDHGB1Q9Y5G3 927 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 ALG6Q9Y672 507 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 MED12Q93074 2177 aa6.92□□□□□ -1.3
SSXP3-201ENST00000442971 HEATR5AQ86XA9 2040 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 POM121CA8CG34 1229 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 GAPDHSO14556 408 aaPredicted RBP6.91□□□□□ -1.3
SSXP3-201ENST00000442971 XPO1O14980 1071 aaKnown RBP6.91□□□□□ -1.3
SSXP3-201ENST00000442971 DDX3YO15523 660 aaKnown RBP6.91□□□□□ -1.3
SSXP3-201ENST00000442971 VEGFDO43915 354 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 DTNBO60941 627 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 CD160O95971 181 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 VIPP01282 170 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 UQCRHP07919 91 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 HBQ1P09105 142 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 CBSLP0DN79 551 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 LCP1P13796 627 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 SNRPBP14678 240 aaKnown RBP6.91□□□□□ -1.3
SSXP3-201ENST00000442971 GM2AP17900 193 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 XRCC1P18887 633 aaPredicted RBP6.91□□□□□ -1.3
SSXP3-201ENST00000442971 GJB2P29033 226 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 CBSP35520 551 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 KRT9P35527 623 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 CASP9P55211 416 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 AUHQ13825 339 aaKnown RBP6.91□□□□□ -1.3
SSXP3-201ENST00000442971 SLC9A5Q14940 896 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 PSMD6Q15008 389 aa6.91□□□□□ -1.3
SSXP3-201ENST00000442971 POLD3Q15054 466 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms