RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 TJP3O95049 919 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 WISP1O95388 367 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 GSTM1P09488 218 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 BPIP17213 487 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 TCN2P20062 427 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 LPOP22079 712 aaPredicted RBP7.64□□□□□ -1.19
CD44-211ENST00000442151 HADHAP40939 763 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 UBE2IP63279 158 aaKnown RBP7.64□□□□□ -1.19
CD44-211ENST00000442151 GSTM4Q03013 218 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 DMPKQ09013 629 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 NFATC3Q12968 1075 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 LAMB3Q13751 1172 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 KRT33BQ14525 404 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 ANKS6Q68DC2 871 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 C11orf63Q6NUN7 778 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 SARM1Q6SZW1 724 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 C6orf15Q6UXA7 325 aaPredicted RBP7.64□□□□□ -1.19
CD44-211ENST00000442151 TMPRSS9Q7Z410 1059 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 RASGRP3Q8IV61 690 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 CDKL3Q8IVW4 592 aaPredicted RBP7.64□□□□□ -1.19
CD44-211ENST00000442151 SFTPA2Q8IWL1 248 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 OR8K5Q8NH50 307 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 APOBEC4Q8WW27 367 aaKnown RBP7.64□□□□□ -1.19
CD44-211ENST00000442151 EXTL1Q92935 676 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 RTP4Q96DX8 246 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 ALS2CR12Q96Q35 445 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 SLC12A9Q9BXP2 914 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 SYTL2Q9HCH5 934 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 STARD5Q9NSY2 213 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 OCIAD1Q9NX40 245 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 PILRAQ9UKJ1 303 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 PRKAB1Q9Y478 270 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 PCDHA13Q9Y5I0 950 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 ARHGEF17Q96PE2 2063 aaPredicted RBP7.64□□□□□ -1.19
CD44-211ENST00000442151 GLYATL1P3A0A0U1RQE8 302 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 APOC4-APOC2K7ER74 178 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 MATN2O00339 956 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 KDM1AO60341 852 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 STK17BO94768 372 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 LCA5LO95447 670 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 GAS8O95995 478 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 APOC2P02655 101 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 SLC4A1P02730 911 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 LIFP15018 202 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 MPSTP25325 297 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 CSF2RBP32927 897 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 FOXM1Q08050 763 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 PRKAA1Q13131 559 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 KCNAB2Q13303 367 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 TAF1AQ15573 450 aaPredicted RBP7.64□□□□□ -1.19
CD44-211ENST00000442151 SLC1A5Q15758 541 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 LINC00303Q3SY05 128 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 SIRPB2Q5JXA9 342 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 LCE3BQ5TA77 95 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 CACHD1Q5VU97 1274 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 CRTC3Q6UUV7 619 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 NPNTQ6UXI9 565 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 PRICKLE2Q7Z3G6 844 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 PRSS42Q7Z5A4 293 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 DAAM2Q86T65 1068 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 VASH2Q86V25 355 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 PPP1R3BQ86XI6 285 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 SYCE1Q8N0S2 351 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 BMPERQ8N8U9 685 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 SIDT2Q8NBJ9 832 aaKnown RBP7.64□□□□□ -1.19
CD44-211ENST00000442151 SPATA22Q8NHS9 363 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 ZNF398Q8TD17 642 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 STAMBPL1Q96FJ0 436 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 TTC1Q99614 292 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 ZNF768Q9H5H4 540 aaKnown RBP7.64□□□□□ -1.19
CD44-211ENST00000442151 IL17CQ9P0M4 197 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 ANAPC2Q9UJX6 822 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 PADI1Q9ULC6 663 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 DNAJC16Q9Y2G8 782 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 ADGRG1Q9Y653 693 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 COL27A1Q8IZC6 1860 aaPredicted RBP7.63□□□□□ -1.19
CD44-211ENST00000442151 PTPRQQ9UMZ3 2332 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 ITPR1Q14643 2758 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 AGRPO00253 132 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 QSOX1O00391 747 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 KLHL41O60662 606 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 MT-CYBP00156 380 aaPredicted RBP7.63□□□□□ -1.19
CD44-211ENST00000442151 FGF5P12034 268 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 NFKB1P19838 968 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 AKT1P31749 480 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 RWDD2BP57060 319 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 TBX2Q13207 712 aaPredicted RBP7.63□□□□□ -1.19
CD44-211ENST00000442151 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.63□□□□□ -1.19
CD44-211ENST00000442151 ATP13A5Q4VNC0 1218 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 DARS2Q6PI48 645 aaKnown RBP7.63□□□□□ -1.19
CD44-211ENST00000442151 TMEM220Q6QAJ8 160 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 KDELC1Q6UW63 502 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 BBS12Q6ZW61 710 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 ZC3H18Q86VM9 953 aaKnown RBP7.63□□□□□ -1.19
CD44-211ENST00000442151 ZNF761Q86XN6 746 aaPredicted RBP7.63□□□□□ -1.19
CD44-211ENST00000442151 SLC25A41Q8N5S1 370 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 UBL4BQ8N7F7 174 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 EXD3Q8N9H8 876 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 DDHD1Q8NEL9 900 aa7.63□□□□□ -1.19
CD44-211ENST00000442151 IPMKQ8NFU5 416 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms