RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 TRIM40Q6P9F5 258 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 DNAJB7Q7Z6W7 309 aaPredicted RBP6.32□□□□□ -1.4
BDNF-211ENST00000439476 CUZD1Q86UP6 607 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 HEATR4Q86WZ0 1026 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 GJD3Q8N144 294 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 ZNF567Q8N184 647 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 PYROXD2Q8N2H3 581 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 OR8K3Q8NH51 312 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 SLC9A6Q92581 669 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 FATE1Q969F0 183 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 PPP1R16AQ96I34 528 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 OSMRQ99650 979 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 MRPL45Q9BRJ2 306 aaKnown RBP6.32□□□□□ -1.4
BDNF-211ENST00000439476 NIFKQ9BYG3 293 aaKnown RBP6.32□□□□□ -1.4
BDNF-211ENST00000439476 REXO4Q9GZR2 422 aaKnown RBP6.32□□□□□ -1.4
BDNF-211ENST00000439476 THG1LQ9NWX6 298 aaKnown RBP6.32□□□□□ -1.4
BDNF-211ENST00000439476 PHF11Q9UIL8 331 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 SAMD4AQ9UPU9 718 aaKnown RBP6.32□□□□□ -1.4
BDNF-211ENST00000439476 TRAF6Q9Y4K3 522 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 MAFBQ9Y5Q3 323 aaPredicted RBP6.32□□□□□ -1.4
BDNF-211ENST00000439476 UBE2QL1A1L167 161 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 H3BN98 237 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 PIGRP01833 764 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 FTH1P02794 183 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 HGFP14210 728 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 AKR1A1P14550 325 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 DPEP1P16444 411 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 CKMT2P17540 419 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 TLX1P31314 330 aaPredicted RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 PRKAR1BP31321 381 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 NUMBP49757 651 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 CDH13P55290 713 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 RPP38P78345 283 aaKnown RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 IRF8Q02556 426 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 SCRN3Q0VDG4 424 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 CCNIQ14094 377 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 IL27RAQ6UWB1 636 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 ZNF467Q7Z7K2 595 aaPredicted RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 PEG10Q86TG7 708 aaKnown RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 HIPK1Q86Z02 1210 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 RIOX2Q8IUF8 465 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 SPPL2CQ8IUH8 684 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 TOP6BLQ8N6T0 577 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 PTGR2Q8N8N7 351 aaPredicted RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 OR52L1Q8NGH7 329 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 USP7Q93009 1102 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 ITCHQ96J02 903 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 BBS4Q96RK4 519 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 USB1Q9BQ65 265 aaKnown RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 ADI1Q9BV57 179 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 ARHGEF4Q9NR80 690 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 VPS4AQ9UN37 437 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 SLC9A8Q9Y2E8 581 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 TIMM13Q9Y5L4 95 aaPredicted RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 GMPPBQ9Y5P6 360 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 PHRF1Q9P1Y6 1649 aaKnown RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 URADA6NGE7 173 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 AZIN1O14977 448 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 AP2A1O95782 977 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 STAU1O95793 577 aaKnown RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 GLAP06280 429 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 GPIP06744 558 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 CHRM5P08912 532 aaPredicted RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 USP17L7P0C7H9 530 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 ZNF286BP0CG31 522 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 ZBTB48P10074 688 aaPredicted RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 FGF3P11487 239 aaPredicted RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 COX7A2P14406 83 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 PTPN1P18031 435 aaKnown RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 PTPRAP18433 802 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 TYMPP19971 482 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 NOS3P29474 1203 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 CAPGP40121 348 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 SLC26A3P40879 764 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 ETV4P43268 484 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 AKR1D1P51857 326 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 ATXN1P54253 815 aaKnown RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 STARD3Q14849 445 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 PCLAFQ15004 111 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 SLC25A52Q3SY17 297 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 LDLRAD1Q5T700 205 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 ZNF57Q68EA5 555 aaPredicted RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 MACC1Q6ZN28 852 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 TIFABQ6ZNK6 161 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 GPRIN3Q6ZVF9 776 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 PHACTR4Q8IZ21 702 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 FSTL5Q8N475 847 aaPredicted RBP6.31□□□□□ -1.4
BDNF-211ENST00000439476 CCDC185Q8N715 623 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 TEX19Q8NA77 164 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 GAB3Q8WWW8 586 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 SELENOMQ8WWX9 145 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 AKAP1Q92667 903 aaKnown RBP eCLIP6.31□□□□□ -1.4
BDNF-211ENST00000439476 TWNKQ96RR1 684 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 KCNK13Q9HB14 408 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 SIRT5Q9NXA8 310 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 FZD1Q9UP38 647 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 PRKAB1Q9Y478 270 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 HES2Q9Y543 173 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 ALS2Q96Q42 1657 aa6.31□□□□□ -1.4
BDNF-211ENST00000439476 GPR25O00155 361 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms