RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 STK19P49842 368 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 ELP6Q0PNE2 266 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 MYLK3Q32MK0 819 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 ZIK1Q3SY52 487 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 PITRM1Q5JRX3 1037 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 CHRDL2Q6WN34 429 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 SH2D5Q6ZV89 423 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 NET1Q7Z628 596 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 MICU2Q8IYU8 434 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 EZH1Q92800 747 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 ACAT2Q9BWD1 397 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 ARMC7Q9H6L4 198 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 GALNT8Q9NY28 637 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 K7ERQ8 282 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 TNFRSF10BO14763 440 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 NRP2O60462 931 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 IDO1P14902 403 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 ATF6P18850 670 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 NRIP1P48552 1158 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 LSM3P62310 102 aaKnown RBP11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 LMAN2Q12907 356 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 GPR33Q49SQ1 333 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 SLC9B1Q4ZJI4 515 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 INO80DQ53TQ3 878 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 XKR6Q5GH73 641 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 C22orf39Q6P5X5 142 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 RNF111Q6ZNA4 994 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 C12orf76Q8N812 135 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 SMAD5Q99717 465 aaKnown RBP11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 MTF2Q9Y483 593 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 NUP205Q92621 2012 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 C15orf38-AP3S2A0A0A6YYH1 394 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 H3BM21 787 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 MTX2O75431 263 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 TM7SF2O76062 418 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 OR4F21O95013 312 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 NR4A1P22736 598 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 GPC1P35052 558 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 ALDH9A1P49189 494 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 THOP1P52888 689 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 SFT2D3Q587I9 215 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 ARMC6Q6NXE6 501 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 ARPINQ7Z6K5 226 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 ADCK1Q86TW2 530 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 CENPLQ8N0S6 344 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 PNPLA1Q8N8W4 532 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 DDHD1Q8NEL9 900 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 ZFAND2BQ8WV99 257 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 FIG4Q92562 907 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 IRF7Q92985 503 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 TBCDQ9BTW9 1192 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 TFB2MQ9H5Q4 396 aaKnown RBP11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 EXOSC4Q9NPD3 245 aaKnown RBP11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 SPAG4Q9NPE6 437 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 CIDEBQ9UHD4 219 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 A0A0J9YYE9 177 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 MT-ND1P03886 318 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 ABCB1P08183 1280 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 ACTR3P61158 418 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 CARTPTQ16568 116 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 MAPKAPK3Q16644 382 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 RTKNQ9BST9 563 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 MARCH4Q9P2E8 410 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 LEF1Q9UJU2 399 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 SCN1AP35498 2009 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 F5P12259 2224 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 TMEM233B4DJY2 109 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 ATG13O75143 517 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 ALDH1A2O94788 518 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 ADH5P11766 374 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 BMPR1AP36894 532 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 GRIA2P42262 883 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 SLC7A2P52569 658 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 ZFP1Q6P2D0 407 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 TPRG1Q6ZUI0 275 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 CYP4V2Q6ZWL3 525 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 RPS27LQ71UM5 84 aaKnown RBP11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 TMCO5AQ8N6Q1 288 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 CELF5Q8N6W0 485 aaKnown RBP11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 GFM2Q969S9 779 aaKnown RBP11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 ROGDIQ9GZN7 287 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 NUDT4Q9NZJ9 180 aa11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 SCHIP1Q9P0W5 487 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC9-202ENST00000438773 RGPD3A6NKT7 1758 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 RGPD4Q7Z3J3 1758 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 CDC7O00311 574 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 ZNF682O95780 498 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 IMPDH1P20839 514 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 MAGP20916 626 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 PEX2P28328 305 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 AQP4P55087 323 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 AP5B1Q2VPB7 878 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 PERM1Q5SV97 790 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 ZNF621Q6ZSS3 439 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 BPIFB1Q8TDL5 484 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 CLP1Q92989 425 aaKnown RBP11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 SLC39A13Q96H72 371 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 OR52B2Q96RD2 323 aa11.42□□□□□ -0.58
TRAPPC9-202ENST00000438773 RETREG1Q9H6L5 497 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms